Detail


ID : Ahg921752

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921752|scaffold_103033.1
Sequence
GGTTTAGGAT TTAGATTCTC GACCATGGCG ATTCTAGGGC TGATCACGAG GGTAACACGA ATAAGCATAA ACAATTCGAG GGTCAGAGTG TACCCAGTGA GGCACTTCCA AAGCAAGGAC CTTTCAAGTA CAAATTCATT CAATGGCCAA GATGCTGCTA AGCTTCCTGT TCTGATCGTC GGCGCTGGAC CGGTGGGCCT CGTTTTATCC ATTCTTCTCA CCAAACTAGG AGTGAAATGT GCTGTTGTTG ACAAAGCCAC AAGCTTCTCC AAACATCCAC AAGCACATTT TATCAACAAC CGATCAATGG AGATCTTCCG TGCATTGGAT GGATTAGCTG AGGAGATTGA AAGATCACAG CCTCCTGTAG ATTTGTGGAG AAATTTTATT TACTGTACAT CTCTCTCCGG CTCAACTCTA GGCACAGTGG ATCACATGCA GCCTCAAGAT TTTGAGAAAG TTGTCAGCCC AGCTTCTGTT GCTCACTTCT CCCAGTACAA ATTGACAAAT TTATTGCTTA AGCGGTTGGA AGACCTCGGC TTTCATGTTC GAGGTTCCAA GGATTCAGAT GGTATTGAGC TTGACTCTGT GGTTGCGAGG CAAATTCTTA TGGGTCATGA GTGTGTGGCG ATTGATGCTA ACAAGGACAG TATTACTGCA ACTGTTTCTT ATCTCAAAGG AGGCAAGCAT ATGAAAAGAA ACATTCAATG TAGTCTACTG GTTGGTGCTG ATGGTGCTGG GAGTGCTGTA AGAAAGCTCA CAGAAATAGA AATGCGAGGG GAAAAAGATC TACAAAAGCT TGTTAGTGTC CATTTTATGA GTAGAGAGCT CGGTGAGTAC CTGATCAGTA GCAGACCAGG GATGTTATTT TTTATTTTTA ACACCGACGG TATAGGAGTT CTTGTTGCCC ATGATCTTCT ACAAGGAGAA TTTGTTTTGC AGATTCCATA CTATCCACCT CAACAGAGTC TATCTGATTT CAGTCTTGAG ATGTGCAAGA TGCTGATATT CAATTTGGTG GGACATCAGC TTTCAGACTT GGATGTAGCT GACATTAAGC CATGGGTCAT GCATGCTGAA GTCGCCGAGA AATTCATGTG CTTTGAGAAC AGAGTGATAC TTGCTGGTGA TGCTGCTCAC CGGTTCCCGC CTGCTGGAGG TTTTGGAATG AACACTGGAA TTCAGGATGC TCATAATCTT GCATGGAAAA TAGCAGCTCT TGTTCAGGGC TCTGCAAAAT CTTCGATTCT TAACACTTAT GAAACAGAAC GTAGGCCGAT TGCCCTCTCC AATACTTCAC TCAGTGTTCA GAACTTCAAA GCAGCTATGT CGGTTCCTTC AGCGCTAGGC CTTGACCCAA CAGTTGCAAA CTCAGTGCAT AGGTTTATAA ACAAAACAGT TGGTTCCATC CTTCCAACTG GGCTACAAAA GGCAATCTTG GATAATGTCT TTGCACTAGG ACGTGCACAG CTTTCAGAAT CTATATTGAA TGAGAGCAAT CCGCTGGGAA ATCAGAGACT TAGCAGATTA AAGAGTATCT TCGAAGGAGG AAAAAGCCTA CAGCTACAGT TTCCTGCAGA AGATCTTGGT TTCAGGTATT TAGAGGGAGC CATTGTTCCT GATAGCAAGT CTGAAGCTGG TGATCCCGAA GTACCGAGTG GTCGTAGAAG AGACTATGTG CCTTGTGCTG AACCAGGTTC AAGACTGCCT CATATGTATA TGAAAATACT GTCAGATTCC AAAAGAGATG TTATTGTTTC TACACTGGAT CTTGTTTCGA CAGAGAAAGT GGAGTTTCTA CTTATAATAT CGCCATTACA AGAGTCTTAT GAGCTAGCTC GTGCTACATT CAAAGTCGGA AAAGAGTTAA TGGCTAATGT AAAAGTATGT GTGGTCTGGC CTAGTAGTGA TGAAGGTCTT GAAAGGGAGA GCAATTCAGC AGTAGCTCCA TGGGAAAATT ATGTCGATGT TATGGAAGTT ATAAGACAAA ATGGTGAAGG AACTTCTTGG TGGAGTATAT GTAAAATGTC AGACAGAGGA TCTATTTTAG TCCGTCCTGA CCAACACATT GCTTGGCGAG CAAAGTCTGG TATTACTTTG GATCCTACTC TGCACATGAG AGATGCCTTC TCCATCATAC TTGGTAAACA ATGATGAACA ACGCAATTTT ATTC
Length2174
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11302627.. 11306077
Download Sequence
A.thaliana
AGI-codeAT1G24340.1
DescriptionFAD/NAD(P)-binding oxidoreductase family protein
TAIR curator summaryA locus involved in embryogenesis. Mutations in this locus result in embryo lethality.
Alias[EMB2421][EMB260][EMBRYO DEFECTIVE 2421][EMBRYO DEFECTIVE 260]
Gene coexpression
MR
MR Locus Description
57.7235 Ahg480096 transferases, transferring glycosyl groups
78.9367 Ahg341194 Homeodomain-like superfamily protein
90.7304 Ahg476599 pentatricopeptide (PPR) repeat-containing protein
93.2094 Ahg318184 Ubiquitin-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression