| Annotation |
|---|
| Description | jgi|Araly1|921949|scaffold_103230.1 |
| Sequence |
TTTGATTTAT AGAGAAAAAA ATGCCACGGA ATGTATACGG TATGAACCAA ACGGAGGTTT ATAGAAATGT CGATCGTGAA GACCCCAAAG CAATTCTCAA TGGTGTTGCA GTTACTGGAC TTGTTGGGAT CTTGCGTCAG CTTGGTGATC TCGCTGAGTT TGCAGCAGAG ATATTTCATG GGATACAGGA GGAAGTTATG GCTACAGCTT CAAGAAGCAA TCAATTGAAG ATTAGATTGC AGCATATAGA AGCTACAGTG CCTCCACTAG AAAAGGCGAT GCTTGCACAG ACAACTCATA TACATTTTGC ATACACAGGA GGTCTGGAGT GGCATCCTCG TATCCCAATT ATGCAAAATC ACTTAATTTA CGACGACTTG CCTCACATTA TCATGGATCC CTATGAAGAG TGCAGGGATC CTCCACGGTT GCACTTGCTT GATAAATTTG ATATAAATGG TCCTGGATCT TGCTTGAAGC GATACTCCGA TCCTACTTAT TTCAGAAGAG CATCAAGCAA CCTGATTCAA GGAAACACGA AGATCCAAAA AGATAAAAAC CTTTGTAAAA TGAAGAAGAA AAAAACTTCG TCAAGGAGTC GAGAGATGTC ACGTTTGGCC TCCATGGCTA ACCAAAATGC CAGGAAGACA TTTACTTCAT TTAGCTTCAG TGGACGAACC ACTTCTACCA AAACCACCTC AACTAGTGAC ATGGAAAAAA GATTTGATTT TCAAGATCTT CATTCTCGCT CTTTTGAGTC CAGAAGTGGT TCAGGCTACA ACGAATGCCT TTCAACCGCA ACCTCTTCAT TGAAGACTGG AGAAAGACCA AAAGGAGTGT TCGTTTCATC CAGCTTGACA CCGGGCTCTT GCACTATCGC TTCAGTCCTT TCTGAATGTG AAACCGAAGA TGCTCATGAT AATTTCCAGT TTAGTCCTTC TCAAGGGCAA GCTGCTCGTG GCTCTTCTTG CGTTAGTTGG GATGAGAAAG TAGAGATAGT GGAATCTCTT GGTCTGCAGA CAGAGGAAGC TTCTGAAATG ATGGAGACGA ACCCTGTTGT AGATAAACCA GATGAGAAAC CAAGCTATGG AGGGACTGGT GGAGTTGATT TCCATTCTAA GGACATTGAA AATGATAAAT CAGAATCAGG ACTACAAAAA CGTACTGGGA TTGATGAGGT AAGAGGAATA AAAACTGTCC GGGAGATTGT GGGAGAACCA AGGGATAGTG AACATGAGAC TGAAAGCGAA GGGGACTGCT TTGTTGATGC GCTTAATACT ATCGAATCAG AATCTGAAAA CAAGCAGGGG CATCAAACTA GTCAAGTGAG CAGTTCCTGT GGTGTTGCAG ATGAGATGTT GGAAAAGTCG GTGTGTGAAC AAAAAACAGA GCAGAATTGC TACAGTGTCG AAGATTCTTG CAGATCAATG GATGGGCTTA TAGCCAACGG TTTTAAAAAT GAAGAGAATG CATCGTCAGC AAATGTAGCT GATGAAATGC ATCAACAAAA TCCACAGGTG GGTTCAGATA TCTACCGCTT ACAAAAAAAT GATCTTTGTG CAAACAAGGA TATGCGTAAC GATTCTGGTG GAAAAGATAT CATCACATTT ACATATGTGC CAGGTCTCGA GAACAGCTTA GCTGATTCAT CAAACCCCTT GATTCATCAT GGCCTACAGG AAAATCAAGA ACCAGAAGCT GAATCTTCTG GTGATCTCGA AGCCATTAAA ATATGGACTA ATGGGGGTCT ATTGGGACTT AAACCATCGA AACCTCCAGT CTTGGCAGTG CAAAGTTCCT TAAGTCCAGA TTGCAAGACC GGGGAAAGGA CAGTTGGTTT TGCAGAAGCT GAAAAAGATA AATCAGATGA TCTAATTGAA AATGCTTCAC ATAGACGTGT TCTGAATAAT GCAAGCTTAG CAACACCAGG AACCCAAAAT CCAATTAGTT CAAGTGGCAT AGCCATGGGT ATTGTAGACC AAAGAGAGTC CCATGAGACT TCTTTCGGAG TTTTTGGACT CAGCCACAAG TTACTCACTA ATGGTTTCCG CAGAAAGGAT TCATTTGCCC ATGATAGAAA GACTGTACCA GCAACCATTC TAGAGAACGA TGAAGTGACT ACAGAGAGGA GGAGGTTTTG TGACCAAGAT ATTGATGACA AAACCTTTGT GGATCCCTTC AGGGATGAAG CTCCCATTGA TTGGATTACT TCGTCTCCGC CTCTTCAACA CATGAAAATA TCTCTCAGTC CCGCTGACAC TCTTCAGGCT TCCAGACTGA AGCTTACATT TGCAGATGGG GACAACAGTT ACAATACATT TTCTTCCTTC CAGTTGCTTC CAGAGGCTGC AACTTCCCTT CCAGATTCGT ATTCCGACGA CGACGACACT TTTTGTAGAT CCTCTCCTTA CATGTCAGAT ACTGATTATC TTAGCGATAA TCACTCCTTG TCATATTCTG AGCAGTGGGA AGAATTCAGT GACAGCCATG GAAGAAAAGA GCAAGAACTA TATGATTCAT TCCACGAAAG TAGGCATGTT GATAACAATG CTGAAGCTTC TCCTCTAGGG ATCAAATCAG AAAGTGATTG TGTCGCAGTA AACCTCTCAT ACCTCCAAAA TCCTGCTGAG CCCTTACCAC CGCCATTTCC GCCCGTGCAA TGGATGGTTT CAAAGACACC TTCAGAGAAA ATTGAAGACA AAACACAGTC CCTACAACTA CAAGACGCTA TCAGGTTCGC ATTTGAGAAG CATATTTCAT TGCCTACAAT GAAGAAAGAA CTGCCTAGCA TGGTGACTCC TGCTCCTAAA CCAGAAATTA AGGTCCATCT GAAGAATAAT GTCAGGGAGG AGAAACAAAG TGCCAACGCA AAGGAGACTG AAACTGGAGA CTTCTTGCAA CAAATCCGAA CACAACAATT CAACCTGAGA CCTGTGGTCA TGACAACGAC ATCATCGGCT GCTGCAACAA CTGACCCTAT CATAAACACT AAGATCAGCG CCATTTTGGA GAAAGCAAAC TCAATACGCC AGGCTGTAGC TAGCAAAGAT GGAGATGAAA GTGATACATG GAGCGATACT TAAAACCCCT TCTGATCAGA TTCC |
| Length | 3104 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12156366.. 12161015 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G29170.1 |
| Description | SCAR family protein |
| TAIR curator summary | Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments. |
| Alias | [ATSCAR3][SCAR3][WAVE2][WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.516 |
Ahg480375 | arabinogalactan protein 9 |
| 28.4253 |
Ahg481491 | Leucine-rich receptor-like protein kinase family protein |
| 39.6485 |
Ahg486566 | FASCICLIN-like arabinogalactan-protein 10 |
| 42.4264 |
Ahg927503 | Leucine-rich repeat (LRR) family protein |
| 44.8776 |
Ahg488255 | Leucine-rich repeat protein kinase family protein |
| 45.6618 |
Ahg920334 | homeobox protein 31 |
| 51.2348 |
Ahg491000 | beta-galactosidase 3 |
| 55.2449 |
Ahg491950 | expansin B3 |
| 57.4891 |
Ahg485285 | IQ-domain 21 |
| 57.6021 |
Ahg480107 | FASCICLIN-like arabinoogalactan 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|