Detail



ID : Ahg922096

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922096|scaffold_103377.1
Sequence
TGTTGTTGTA ATGGTTTTAT CAATGGAGTT TGGATTTTCA ATTGGGTCTT GCTTCAAGGC AGAAAACCTA CCTGTTCTAA TCTCTGTTAT AGACTGCTTA TATAATAAAG CTTCAGATTT TATTTTCCTA ATCATCAAAC TGTTTCAGGA AAAGTATAGT ACCATGACAG GACTGGATGG GAAGACCGAA ATTCAAATGC TTGCTTTTAA ATCTTCAAAG ATTAGACTCT TGAGGAGCAT GGCCATAGAG AATGAGACAA TGAGACTGTT GATTTTTTGT ATCGTCGGTT TTCTTGTTGT TTTTTTTTTT TGTGTGTGTA TAATGTGCAG GTCTTTGACT TTTCAGGCTG ATTGGCTAGC ATGAAGATGT GAGATGCAAA TATC 
Length384
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3408136.. 3408777
Download Sequence
A.thaliana
AGI-codeAT3G09150.2
Descriptionphytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)
TAIR curator summaryRequired for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast.
Alias[ATHY2][GUN3][HY2][ARABIDOPSIS ELONGATED HYPOCOTYL 2][GENOMES UNCOUPLED 3][ELONGATED HYPOCOTYL 2]
Gene coexpression
MR
MR Locus Description
1.73205 Virus0702
4 Virus3916
5.91608 Ahg356466
12.1655 Ahg906134
15.8745 Ahg946217
16.1245 Virus0638
16.2481 Ahg338204
16.2481 Virus3251
18.735 Virus2128
22.3607 Ahg936476 Plant self-incompatibility protein S1 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression