Detail



ID : Ahg922142

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922142|scaffold_103423.1
Sequence
AATAAAATAA AAATAAAAGA ATGGACAAAA TCTATCTTTT CTTTCTTCTC TTTTTCGCTG CATCGTCCTC TATATCATTG AGTTCTGCAG ATTCCGTAAC TATCTACGAA GATTTTGTCC GATGTTTCAA AAACGTAACA AGTATCACCG ACGATGATCT CTCCGCCGTC GTTTTGCCAC GTACCAGCGT TTCCTTCACT CCTACCTTAC GCGCTTACAT CAGAAACGCG CGTTTCAACA CCTCCTCAAC GCCAAAACCG TCGATCATCA TCCTGCCACG TGTCGATTCC CACGTTCAAG CCGCCGTGAT CTGCGCCAAA ACGCTGAATC TCCAGCTTAA GATCCGTAGC GGTGGTCATG ACTACGACGG TCTCTCTTAC GTCTCCGCTG TGACGTTCCT CGTCCTTGAT CTCTCTAATT TCCGAAACGT CACCGTTGAT ATAACCGATG ACGGAGCAGG ATCCGCTTGG GTACAATCCG GCGCGACGCT CGGCGAGCTT TATTATCGGA TCTGGGAGAA GAGCGAGGTC CATGCTTTCC CCGCCGGCGT ATGTCCTACC GTCGGCGTCG GAGGACACGT AAGCAGCGGT GGATACGGAC ACCTGATTCG AAAATTTGGT CTCACTATAG ATCACGTCGT TGACGCCACA ATCGTCGACG CTAACGGTCA AATTCACGAT CGGAAATCTA TGGGAGAGGA TCTTTTCTGG GCGATTCGCG GCGGAGGCGG CGGAAGCTTC GGCGTTATTC TAGCTTTCAA AGTGAAACTC GTGGAGGTTC CAAAAACCGT AACCGTTTTC AGGGTTGATA AATCGGTTGA CGAAAATGCC CTTGACATGG TTCATAAATG GCAATTCGTA GCTCCAAGAA CCGACCCGGG TCTATTCATG AGAGTGTTGT TATCCTCTCC GACGCAGAAC AAAACACGTA CGGTGAACGC TAAACTCAGG GCGTTGTATC TTGGAAGAGC TGACGACGTC GTTTTAAGGA TGACGGAGGA GTTTCCGGAG TTGGGTTTGA AGAAAGAAGA TTGTAAGGAG ATGACGTGGA TCCAATCGCT ATTATGGTGG ATGAATCATG TAGACGTGGA TAAAGTTAAA CCGGAGATTT TGCTCGAGAG AGAACCGGAT TCGGCTAAAT TTCTCAAGAG GAAATCGGAT TACGTTGAGA AGGAGATGAC CAAACCAGAA TTAAACCGAT TGTTTCAGAA ATTGGCGACG TTAGATAGAA CCGGTTTGGT TTTGAATCCG TATGGAGGGA ATTTAAACGT GACCGCAGTG AATGAAACAG CGTTTCCGCA TCGGCACAAA CTATATAAGA TCCAGCATTC GGCGACTTGG CCTGATGCTG GACCGGAAGC GGAAAGACTC TATATTGGTA ATTTAAGAAC GACCTATAAA TTCATGACTC CGTTTGTGTC GAAGAATCCT CGAAGTTCGT ATTTGAACTA TAGGGATATT GATATCGGGG TTAATGATCA TGGAGTGGAT AGTTATCGAA AGGGAGAAAT CTACGGGAGG AAGTATTTTG GCGAGAATTT TGATCGATTG GTTCGTGTTA AAACGGCTGT TGATCCGGAT AATTTCTTTA GAAATGAGCA GAGTATACCA ACTTTACCTC CAAATAGAAG ATAGAAAACT TAAGTCGATG TAAA 
Length1654
Protein Sequence
Protein Residue
Map Locationscaffold_1: 13136913.. 13138561
Download Sequence
A.thaliana
AGI-codeAT1G30740.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.74597 Ahg898513 UDP-Glycosyltransferase superfamily protein
10.583 Ahg470333 Protein of unknown function (DUF789)
11.3137 Ahg949484 ferric reduction oxidase 6
12.2066 Ahg950909 Major facilitator superfamily protein
14.8324 Ahg941688
18.7617 Ahg480688 Chaperone DnaJ-domain superfamily protein
19.4165 Ahg909946 beta glucosidase 11
20.347 Ahg909860 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
23.6643 Ahg477208 Galactose oxidase/kelch repeat superfamily protein
26.5518 Ahg943085
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression