Detail



ID : Ahg923290

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923290|scaffold_104571.1
Sequence
TTGTCTTTGT ACAGATCTCG ATGCCTTCTC GTAGAAGAAC TCTCCTCAAA GTCATCATCC TCGGCGATAG CGGATATGTG AATAAGAAGT TTAGCAACCA GTATAAGGCG ACCATTGGGG CTGATTTCTT GACTAAGGAA GTGCAATTTG AAGACCGGCT TTTCACTTTA CAGATCTGGG ACACAGCTGG TCAGGAAAGG TTTCAGAGTC TTGGTGTGGC ATTTTATCGT GGTGCTGATT GCTGTGTTCT TGTATATGAT GTCAACTCCG CAAAGTCATT TGAGGATCTC AACAACTGGA GGGAAGAGTT TCTGATCCAG GTATAATTAT AGATTTATAT TTATACTCT 
Length349
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24177066.. 24178612
Download Sequence
A.thaliana
AGI-codeAT1G49300.1
DescriptionRAB GTPase homolog G3E
TAIR curator summaryencodes a small GTPase involved in membrane trafficking. Gene expression is induced by hydrogen peroxide and lines. Lines overexpressing the gene are more tolerant to high salt and hyperosmotic conditions.
Alias[ATRAB7][ATRABG3E][RABG3E][ARABIDOPSIS RAB GTPASE HOMOLOG 7][ARABIDOPSIS RAB GTPASE HOMOLOG G3E][RAB GTPase homolog G3E]
Gene coexpression
MR
MR Locus Description
17.3205 Ahg890125 gamma-soluble NSF attachment protein
19.3649 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
19.8746 Ahg319769 MAP kinase 7
26.3818 Ahg495975 Protein kinase superfamily protein
30.3315 Ahg492243 alpha/beta-Hydrolases superfamily protein
31.749 Ahg926235 eukaryotic elongation factor 5A-3
32.7261 Ahg490773 TLD-domain containing nucleolar protein
34.4238 Ahg496645 beta-ureidopropionase
35.6931 Ahg921751 Acid phosphatase/vanadium-dependent haloperoxidase-related protein
38.8587 Ahg495173 Clp ATPase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression