Detail



ID : Ahg923472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|923472|scaffold_104753.1
Sequence
CTTCATAGTT GTTCTATGAA ATGTCTCCTC TCAACGATCT TAAGATCAAT CTCAATGGCC AATACACATT CTTCCTCAAT CAGGACGTGA TTTCAAAGTA CTCTGGAAGT TTGAGGAAGA TGATTAAACA GAGCAAAAGG AAGAGAAACA AGAAAAAGAG AATCATCACT ATCGAGATTG ATGATTTTCC TGGTGGACCA GATGGGTTTG AGCTGGTTTC AAGGTTCTGT TACAACAACG GAGAAATCTC AATCGATGTC TCAAATGTCT CGACTTTGTA CTGCTGCTCT GTTTTTCTAG CCATGTCGGA GAAGTTCTGT TTCTCTAATC TCTTCCTTCA GACCGAGAAG TTTCTAGAAG AAGTGTTATA TGGGTCTTGG AGCGACATCG TTTTGTGTCT CAAGAACTGC GAGCAAGTGT TCTTCCAAGC AGATTCGTAT GGTCTTGTAG ATAAACTCAT CTTCGCAGCT TTGACCAAAA TCTCTCGGAA TTCAGAAACA TTTTCTTCTT CTTCGCTCTC TTCCTTCGCC TCCTCTCTTT CTCCTGAGAT GGCCAAGAAC ACGCCGGAAT CAGACAGTAG GTATATTTCA CGGTCTGTTT CTTGCGGAAG AAGCAACGAG TGGTGGTTCG ACGATATGAC AACTCTTTCC TCGAGTATTA TTTTGAGACT AATCATGATC ATTGGAGCTT ACAAGACAAA CATAAAAAGC TTAGTCCAAA CCAGATTTCT TCTCCATTAT CTCAAGACAA AACTCCAAAC CAAATCAAGA ACTACTACAG AGCTTATGAG GAACAAGCTC GAGTACTCCA ATTTAGCTGA CACAGCGGCT AAAGGAGTGA TTTCTGCAGG GAAAACCGCG TTTTCTTGCA GGAAACTCTT TTGGGTTCTT TGGGTTTTAT CCAGTTTTAG CCTAAGTAGA GAGTCGAGAA TTGGTTTAGA AACCCTAATA GGAGAAATGC TGGAACAAGC AACACTTGAT GATCTTCTGA TACCTGCAGG AGGAAGCAAA GAGAGCGGTT TCTACAATGT GGATCTTGTG ATAAGATTAC TAAAAGTGTT TGTGAAGAAC AGAGAAGAAG AAATATCAAG AGAGAAGAAC ATGAAAGAAA TTGGGAAATT GATTGATAAG TATTTGAGAG AGATATCTCC AGATCAGAAT TTGAAAGTCT CCAAGTTTCT TGGTGTTGCA GAGAGTTTGC CAGATTCAGC TAGAGATTGC TTTGATGGAG TTTACAGAGG AATTGACATC TATCTACAGT CTCATCCGAA TCTAACACCC CAAGATCGAA CAGAGATATG TCGATGTCTC AACTACAAGA AACTAACAAT GGAGACGTGC AAACAGCTCG CCAGAAACCC TAAGATCCCT CCAGAAATCG CCATTGAAGC ACTTAAGTCC AGATGTGACA ATCAAGAACA CACAACTTCA GATGTTAAAG TTGCAAACAA GAGTTTTTCT TGTAGATATT CAGAAGAGAA GAAGAAGCCT GTGCTATTGC ATCTTGAGAT ATCCGAGAAA TTAGCCGAGA GGTTGAAGAG TAGAGGAGGA TATAACTTGA GTGTTATGGA TAGTTTCAGA GAAGGCTTAT GAGGAAAATG CTAAAGGTCC CA 
Length1612
Protein Sequence
Protein Residue
Map Locationscaffold_1: 25045833.. 25048325
Download Sequence
A.thaliana
AGI-codeAT1G50280.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.0384 Ahg496502 Pectin lyase-like superfamily protein
16.3401 Ahg934869 expansin A8
19.6469 Ahg893513
29.189 Ahg488130 Pollen Ole e 1 allergen and extensin family protein
40.2741 Ahg473383 other RNA
41.7133 Ahg929671
44.8665 Ahg486262 Basic-leucine zipper (bZIP) transcription factor family protein
47.7493 Ahg943849 SAUR-like auxin-responsive protein family
50.4975 Ahg471076 Eukaryotic aspartyl protease family protein
50.5173 Ahg491249 Leucine-rich repeat protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression