Detail



ID : Ahg924152

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924152|scaffold_105433.1
Sequence
GTCTGTCTAG TTGTTGAGAG ATGCTCAGGC TACGGAGATC TCTGTTTCTG CTCCTAACCG TCTGGTTCTT GTATAGTTCC GGTTCGGTTC ACGTGGTGGT TCGAGCCCAA AACCAAAACG GAGCCACTAC TCATCCCGAC GAAGTGATTG TGGAAACAAC AGCGCGAGCT TTGAACTCAA TCTTCGCGAC TTGGAAGATC CAAGCGCCCA AGGAATGGAA CATCAGCGGC GAACTTTGCT CCGGCGCCGC CATCAACGAT GTCACCATCG ACGACAAGGA CCACAACCCT CTAATAAAAT GCGGCTGTAC TTTCGTCAAC TCCACAATCT GCCGCATCAC CGCCCTAAAG GTTTATGCGA GAGATGTTGT AGGACCTATA CCTCAAGAGC TCTGGACTTT GATATTCCTC ACCAATCTGA ACCTGGCTCA AAATTTTCTG ACAGGCTCAC TGCCTCCTGC AATTGGGAAT TTGACTCTAA TGCAGTGGAT GACTTTTGGG ATCAATGCCT TGTCTGGCCC TGTTCCTAAG GAAATTGGTC GCCTCACAGA TTTACGATCA CTTAGTATTG GTTCAAATAA CTTTTCCGGT TCTATACCTG CTGAGATCGG GAATTGTACA AAACTACAGC AAATATACAT AGGTAGTTCT GGACTCAATG GGGAAATACC TTTATCCTTG GCTAATCTTG TGGAGCTGAC TGTCGCTTGG ATTATGGATC TTGAAGTTAC TGGTCGGATA CCAGACTTTA TAGGAAATTG GACCAAACTT ACTACCTTGA GAATTATGGG AACTGGTTTG AGTGGTCCGA TACCGTCGTC ATTTTCCAAC TTAGCTTCTA TGAGCCAGCT AGTATTGAGG AACAACAATC TCACTGGGAC AATACCGTCT AATATTGGAG AATACTCAAG TTTGCGACAA GTTGATTTGA GCTTCAACAA ACTACATGGA CCAATTCCGG CTTCACTTTT CAACTTAAGT CAACTTACTC ACTTGTTTCT GGGAAACAAC ACGTTGAATG GCTCCTTGCC CACTCAAAAG AGGCAGTCTC TGATCAATAT AGATGTGTCG TACAATGATT TGTCTGGAAG TCTTCCTTTA TGGGTCAGTT TACCAAACTT GAAACTCAAT CTAGTAGCTA ACAATTTCAC ATTGGAAGGT CTTGACAACA GTGTTTTATC AGGACTGAAC TGCCTGCAGA AGAATTTCGC CTGCAATCGC GGCAAAGGAA TCTATTATAA CTTTTCGATT AATTGCGGAG GCCCAGAGAT AAGGTCTGCT AGTGGAGCAC TATATGAGAA AGAGGACATG GATCTTGGAC CAGCTTCGTT TGTCGTGAGT GCTGCTCAGA GATGGGCAGC CAGTAGTGTA GGAAATTTTG CCGGAAGTAG CAGAAATAAA TATAGAGAGA CTTCACAATC ACAATTTATC AACACTTTGG ACTCGGAGCT TTTTCAGTCA GCAAGACTTT CTGCATCTTC CCTAAGGTAT TATGGGTTGG GGCTTGAAAA TGGAGGCTAC ACCGTTACAC TTCAGTTTGC TGAAATACAA ATTCAAGGTT CTAACTCTTG GAAAGGTATT GGAAGACGAC GTTTTGACAT TTATGTCCAG GGAAGACTTG TTGAAAAGGA TTTTGATATA CGCAGAACAG CTGGTGGGTC TTCGGTTCGA GCAGTTCAGA GAGAATATAA AACAAATGTA TCAGAAAATC ATCTTGAAGT TCATCTTTTC TGGGCTGGAA AAGGAACATG CTGTATTCCT ATCCAAGGGG CTTATGGGCC ATTAATATCG GCCATCAGTG CAACACCAGA TTTCACACCA ACTGTGGCTA ATAGGCCACC ATCAAAGGAA AAGAACATGA CTGGTACTAT TGTGGGTGTC ATTGTTGCCG TAGGACTCTT GAGCATCTTA GCGGGTGTGG TTATCTTCAT CATCCTAAAA AGTAGAAAGC CGTACACAGA TGATGAAGAG ATACTTAGTA TGGACGTAAA GCCTTACACC TTTACTTACT CAATACTTAA AAGTGCAACA CAAGATTTCG ATCCCTCAAA CAAGCTTGGA GAGGGAGCGT TTGGGGTTGT TTATAAGGGA TCCCTCAATG ATGGAAGAGA GATCGCAGTG AAGAAGCTGT CAACGGTTGG ATCACGGCAC GGGAAGGGTC AATTTGTTGC AGAAATTGTA GCAATTTCTT CAGTTCTGCA TCGTAACCTA GTAAAACTTT ACGGGTGCTG CTTTGAAGGA GATCAGCGTT TGCTCGTATA TGAGTATCTC TCTAATGGAA GTCTCGATGA CGCATTATTT GTGAGTGGAA GGAAAAACTC TGATGAAAAC CTGGAGGAGG GAAAAAAATA TCTTCTTGAA TGGGCATGGA ATCTACACGA GAAAAGCCGT GACGTTGAAC TAATTGATGA TGAGCTAGGT GAATACAACA TGGAAGAAGT GAAACGCATG ATTGGCGTTG CTCTGCTTTG CACTCAGTCG TCTCATGCGT TGAGACCACC AATGTCACGC GTGGTAGCCA TGTTGTCAGG AGATGCTGAG GTCAATGATG CCACCTCGAA GCCAGGCCAT CTAATCGACA GTATATATGA TGACACCACA AGCTCCTCTT ACAGTGGCTT TCAAACCAAA GACACAAGCT TCTCAACGAG CTTTGTGACG CCTGGCCCAA GAGACAGCGA CAGTAAGCCA ATGCTTGGAT TCAAGATCAA GGAGGGAAGA TGACAAAGAC CCTTCTTTGT AAC 
Length2743
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28215893.. 28231638
Download Sequence
A.thaliana
AGI-codeAT1G56140.1
DescriptionLeucine-rich repeat transmembrane protein kinase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.48331 Ahg938727 Insulinase (Peptidase family M16) family protein
11.9583 Ahg924151 Leucine-rich repeat transmembrane protein kinase
16.4924 Ahg490404 WRKY family transcription factor
17.0294 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
18.0831 Ahg924153 Leucine-rich repeat transmembrane protein kinase
18.9737 Ahg489999 phospholipase D gamma 1
22.0454 Ahg947663 lysine histidine transporter 1
25.7876 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
30.7246 Ahg485812 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
31.241 Ahg491768 autoinhibited Ca(2+)-ATPase 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression