Detail



ID : Ahg924200

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924200|scaffold_105481.1
Sequence
TTTAAGCTTT CAGACAAAAC AATGACGACT ACTTTTGTCC TTTTTCTTCT TCTCCTCTGT GTTTTTGCGA TCAACCCTAG TCAACAAGAA GAGATCAATC AACAGAATCC AGGGATATAT CATCAAAAGT TGCTATACAA GGTCCAACAA TGGAGAACAG CTTTGAAAGA ATCAAATGCT GCAGAACTCA AGATATCTTC AGCAATCATT GTAGTTGGAG GGTTATGCTT CCTTGTTGCC TTGATCTCGA GCGCATGTGT AATCGGCGGT AGAGGTTTAT TTATTCCAAT CATGACTACA GCTGCACGGC TAGACTTGAA AACAGCTCCA AGCTTCTCTG GTATAAGAAA TAGATGTTAA GTTTTATTGA TAATGTTTGA 
Length380
Protein Sequence
Protein Residue
Map Locationscaffold_1: 29088990.. 29089371
Download Sequence
A.thaliana
AGI-codeAT1G54470.2
DescriptionRNI-like superfamily protein
TAIR curator summaryEncodes a Cf-like gene in Arabidopsis that confers downy mildew resistance to several isolates of Peronospora parasitica.
Alias[RPP27][resistance to Peronospora parasitica 27]
Gene coexpression
MR
MR Locus Description
4.47214 Virus1007
5.91608 Ahg494805 low-molecular-weight cysteine-rich 57
6.16441 Ahg903960 FBD domain family
6.32456 Virus1855
6.32456 Ahg913031
6.32456 Ahg942933 RNI-like superfamily protein
6.32456 Ahg356159
6.32456 Virus1062
6.32456 Ahg906657 Uncharacterized protein family (UPF0016)
6.32456 Virus0751
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression