Detail



ID : Ahg924700

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924700|scaffold_200261.1
Sequence
TCAAATTCAA TCCGTTAAAA AATGGAGAGT CAAAAGCAAG AAGACAATGA ATACATTTTC CGCAGTTTGT ATCCATCTGT GCCCATTCCT GACAAACTTA CACTGCCTGA ATTTGTGCTC CAAGGAGTTG AAGAATACAC AGAAAATGTG GCGTTTGTAG AAGCGGTGAC CGGAAAAGCG GTGACGTACG GTGATGTAGT GAGGGACACA AAGAGGCTAG CCAAAGCGTT GACCTCTCTC GGACTAAGGA AAGGTCAAGT AATGGTTGTG GTTCTACCAA ACGTCGCTGA GTATGGGGTT ATTGCCCTTG GCATTATGTC TGCCGGTGGA GTCTTCTCCG GTGCAAATCC GACGGCTCTT GTCTCCGAGA TCAAGAAGCA AGTTGAAGCT TCCGGTGCTA GAGGAATCAT CACTGATGCT ACTAACTATG AAAAGGTGAA AACACTAGGT TTACCGGTGA TAGTGTTAGG TGAAGAGAAG ATCGAAGGAG CAGTAAACTG GAAAGATCTT CTAGAAGCAG GAGACAAATC CGGAGATACC GACAATGAAG AGATTCTTCA GACAGATCTT TGTGCACTTC CTTTTTCTTC AGGAACAACC AGGATTACAA AAAGGAGTAA TGCTCACACA TCGTCTGAAA TGATCGGTCA GATCGTGACG CTTGGTTTGA TCCCATTCTT TCACATTTAC GGTATCGTTG GCATATGTTG CGCTACAATG AAGAATAAAG GCAAAGTTGT TGCTATGAGT CGGTACGATC TAAGGATTTT CTTGAATGCT TTGATTGCGC ATGAGGTTTC GTTTGCGCCT ATAGTTCCGC CGATTATATT GAATCTTATT AAGAATCCGA TAGTTGATGA GTTTGACCTT TCGAAGCTTA AACTTCAGTC TGTTATGACT GCTGCTGCTC CTTTAGCTCC TGAGCTTCTT ACTGCCTTCG AAGCCAAGTT TCCTAACGTC CAAGTCCAAG AGGCTTATGG ATTAACGGAG CATAGTTGCA TTACGTTAAC TCACGGAGAT CCAGAGAAAG GACAAGCAAT CTCGAAACGA AACTCTGTCG GTTTCATACT TCCGAATCTC GAGGTGAAGT TCATAGATCC TGACACCGGT AGATCACTCC CGAAGAACAC GTCCGGTGAG CTATGTGTGA GGAGCCAATG TGTAATGCAA GGTTACTTCA TGAACAAGGA AGAGACTGAC AAGACAATTG ATGAACAAGG TTGGCTTCAC ACAGGAGATA TAGGTTACAT CGATGATGAT GGAGATATCT TCATCGTTGA TCGTATCAAA GAACTTATTA AATACAAAGG TTTCCAGGTT GCTCCCGCCG AGCTTGAAGC TATTCTACTC ACTCATCCAT CCGTTGAAGA CGTTGCCGTC GTGCCGTTAC CGGACGAGGA AGCCGGGGAG ATTCCGGCGG CTTGCGTGGT GATAAATCCG AAAGCGACGG AGAAGGAAGA AGACATTCTC AACTTTGTTG CAGCAAATGT GGCTCATTAC AAGAAGGTCA GAGCCGTCCA TTTTGTGGAT TCAATCCCCA AATCTCTCTC TGGTAAAATC ATGAGGAGGC TTCTTAGAGA CAAGATCCTC AGCATCAACA AGAAGTAGAA CAAAGAAAAC TCTTACAAGC T 
Length1631
Protein Sequence
Protein Residue
Map Locationscaffold_2: 1279691.. 1282462
Download Sequence
A.thaliana
AGI-codeAT1G62940.1
Descriptionacyl-CoA synthetase 5
TAIR curator summaryencodes an acyl-CoA synthetase, has in vitro activity towards medium- to long-chain fatty acids and their hydroxylated derivatives. Expressed in the tapetum. Involved in pollen wall exine formation. Null mutants were devoid of pollen grains at anther maturity and were completely male sterile.
Alias[ACOS5][acyl-CoA synthetase 5]
Gene coexpression
MR
MR Locus Description
2 Ahg925746 Beta-galactosidase related protein
4 Ahg899602
8 Ahg473168 5'-3' exonuclease family protein
8.94427 Ahg948315
11.4891 Ahg897566
11.6619 Ahg347194
19.4422 Ahg892670
20.5913 Ahg909828
27.9821 Ahg952676 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein
29.1033 Ahg947473
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression