Detail



ID : Ahg925155

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925155|scaffold_200716.1
Sequence
GAGTTGAACT AAGATTTGAG ATGGAGATAT CAGCTCTTCT TACATCTGCC GGGATTAATA TCTCGATATG CATAGTGCTT TTGTCACTTT ATTCTATACT TAGGAAACAA CCATCCAATT ACTGTGTATA TTTTGGCCGA AGGCTTGTTT GTGGTGGGGC TAGACGTTAT GATCCGTTTT GGTATGAGAG GTTTGTGCCG TCTCCAAGTT GGCTGGTTAA AGCATGGGAA ACTAGTGAAG ATGAGTTATT AGCTGCTGCT GGTCTTGATG CTGTTGTCTT CCTTAGGATG GTCCTTTTCA GCATTCGTAT TTTCTTTATA GTTGCTGTTA TTTGCATTGC CTTTGTACTG CCTGTTAATT ATTATGGGCA ACCGATGGTG CATAAGGAAA TCCATTTGGA GTCATCCGAA GTGTTCACAA TCGAAAATCT TAAAGAAGGC TCCAAATGGC TGTGGGTTCA TTGTCTTGCA CTGTACATTA TAACCTCAGC GGCATGTCTT CTTCTTTATT TTGAGTATAG GACCATAGCT AAAATGAGGC TTGGACATAT TACTGGATGT GCCTCAAAGC CAAGTCAATT TACCGTTCTT ATCCGTGCTA TTCCATGGTC TCCTGAGCAA TCTTACAGCG ACACACTGAG CAAATTCTTC ACAAATTACT ATTCATCAAG CTATGTGTCC CACCAAATGG TCTACCATAA TGGTATCATT CAGAGACTGT TGCGTGAGGC GGAGAGGATG TGCCAGACTC TAAAACACGT TTCTCCTGAA ATCAATTGTA AACCAAGTTT GAAGCCATGC ATCTTTTGTG GAGGACCTAC AGCCACAAAT TCTTTTCATA TCCTATCTAA TGAGGCGGAC AGTGTGAAAG GAATGGAGCT TGGTGAGTTG ACTATGACTA CGACAGAGCA AGAACGTCCA GCTGCTTTTG TGTTTTTCAA AACACGCTAT GATGCTCTTG TTGTTTCAGA GGTTCTACAA TCATCAAATC CTATGCTATG GGTGACAGAC TTAGCTCCAG AACCTCACGA TGTGTATTGG AAGAATCTCA ACATTCCTTA TCGACAACTT TGGATACGGA AAATAGCAAC CCTTGTTGGT GCAGTTGCTT TCATGTTTGT GTTTCTTATT CCCGTGACCT TCATTCAAGG GCTGACTCAA CTAGAGCAGC TGTCTCACGC ATTTCCTTTT CTAAGAGGCA TCTTGAGGAA GCAGTTTATA AGCCAGGTCA TCACAGGGTA CTTACCCAGT GTGATCTTGA TTCTATTTTT CTATGCCGTT CCACCATTGA TGATGTATTT TTCGGCCTTG GAGGGATGTA TTTCACGGAG TATAAGGAAG AAGAGTGCTT GCATCAAAGT CTTATATTTT ACCATTTGGA ATGTGTTCTT CGTGAATATT TTATCGGGGT CTGTTATCAG GCAACTGAAT GTCTTTTCTA GTGTCAGAGA CATACCTGCA CAACTTGCAA GATCAGTGCC AACACAGGCT GGCTTCTTCA TGACCTATTG TTTCACATCT GGTTGGGCGA GTTTGGCTTG TGAAATAATG CAGCCTATGG CTCTTATCTG GAATCTGGTA GCAAAAGTTG TTACCAAGAA CGAGGATGAG TCATATGAAA CACTTAGGTT CCCATACCAC ACCGAAATTC CTCGGCTGCT TTTGTTTGGG CTCCTGGGTT TCACCAATTC AGTCATAGCA CCACTGATAC TGCCGTTTTT GCTGATATAC TTTTTCCTTG CATATCTCAT ATACAAAAAT CAGATACTCA ACGTGTATAT TACAAAGTAC GAAAGCGGTG GACAATACTG GCCTATTTTC CACAACACAA CAATCTTTTC ACTGATCTTG ACACAGATTA TAGCTTTGGG TTTCTTCGGA TTAAAGCTAT CAACGGTTGC TTCGGGTTTC ACTATACCAT TGATTCTTCT CACTTTGCTT TTTAGTGAGT ATTGTCGGCA GAGGTTTGCG CCCATTTTCA ACAAAAATCC TGCCCAGGTT CTCATAGATA TGGACAGGGC TGATGAAATC TCAGGAAAGA TGGAAGAGTT ACATAAAAAA TTGCATAATG TATACTCGCA GATACCATTA CACTCTGAGA AATCATCGAG TAAAGCTGAA TGCAGTAATC CTTTCAAAAA TCAGGAGTTA CCAGATCCTG AAAAATTGAA GCCAGAGGAA GGGGATGCGA TAGCGAAAGA GTTATGGGGA TATCAAGGCA ATGAATCTGG TCAAGAACAT GACGCTAAGT CCTGTCCCAG TGCTTCACCA GAGCATCTTT CTCCAAAGCT GATCGAACTT CACAAACGGA ACTAGACAGA CATTTTTTAC TAGTG 
Length2335
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3694191.. 3698809
Download Sequence
A.thaliana
AGI-codeAT1G58520.2
Descriptionlipases;hydrolases, acting on ester bonds
TAIR curator summary
Alias[RXW8]
Gene coexpression
MR
MR Locus Description
6 Ahg930155 B-box type zinc finger family protein
6.48074 Ahg476523 B-box type zinc finger protein with CCT domain
7.34847 Ahg493645 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.34847 Ahg485777 Regulator of chromosome condensation (RCC1) family protein
11.6619 Ahg488445 conserved peptide upstream open reading frame 10
12.1244 Ahg904747 Protein of unknown function (DUF760)
12.4097 Ahg479955 Serinc-domain containing serine and sphingolipid biosynthesis protein
12.8452 Ahg920964
13.0384 Ahg945245 manganese tracking factor for mitochondrial SOD2
13.784 Ahg491203
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression