| Annotation |
|---|
| Description | jgi|Araly1|925322|scaffold_200883.1 |
| Sequence |
TTGAGTGCAA GAGTGTTATA TGATGGCTAC TGCAGCTGTT ATAGGACTCA ACACTGGGAA AAGATTGTTG AGTTCATCGT TTTATCACTC AGATGTTACC GAGAAGTTTT TATCTGTAAA TGATCATTGT TCATCACAGT ATCATATTGC TTCAACGAAA AGCGGGATAA CTGCGAAAAA GGCGTCATCA TCGAACTATA GTCCGAGTTT TCCTTCATCG AATCGTCACA CACAATCTGC CAAGGCTTTG AAAGAGAGTG TAGATGTTGC TTCTACTGAG AAGCCATGGA TACATAATGG AAGTCATAAG GAATTGGAAG AGGAAGGTTA TGATGATGAT CTAATTGGTC ATTCTGTTGA GGCACTTTTA CTGCTACAAA AGTCTATGTT GGAGAAAAGT TGGAATCTTT CGTTTGAGAA GGCGGCGTCA AGTGAGTCCT CGAGCAAGAG GACTATCCGG AAGAAGAAGA TTCCGGTCAT CACCTGTTCA GGGATTTCAG CTAGGCAAAG GAGGATTGGT GCTAAGAAGA AAACTAATAT GACTCATGTT AAAGCAGTTT CAGATGTTTC TAGTGGAAAG CAAGTCAGAG GTTATGTGAA GGGTGTAATA AGTGAAGATG TGCTTAGTCA CGCGGAAGTT GTGCGCTTGT CCAAGAAAAT CAAATCTGGT CTTCGTCTTG ATGATCATAA GTCAAGATTG AAGGATAGAT TAGGCTGTGA GCCTTCTGAT GAACAGCTTG CAGTATCCTT GAAGATATCT CGGGCCGAGC TTCAGGCGTG GTTGATGGAA TGTCATCTAG CTAGAGAGAA GTTGGCTATG AGCAATGTGC GTTTGGTTAT GTCTATTGCT CAGCGATACG ATAATTTGGG AGCAGAAATG TCTGATCTTG TTCAGGGTGG TCTTATCGGA CTTTTGCGGG GAATAGAGAA ATTTGATTCT TCCAAAGGTT TCAGAATTTC AACTTATGTA TATTGGTGGA TTCGACAGGG TGTCTCAAGA GCATTAGTGG ACAACTCAAG AACCTTGAGG TTACCTACTC ACCTACATGA AAGACTCGGT CTAATCCGAA ATGCAAAGCT TAGACTTCAG GAGAAAGGAA TCACACCCTC TATTGATAGG ATTGCAGAGT CTCTAAACAT GTCGCAGAAG AAAGTTAGAA ATGCAACAGA GGCTGTTAGC AAAATATTTT CTCTAGACAG AGATGCATTT CCTTCTTTGA ACGGTCTCCC TGGAGAAACT CATCACAGTT ACATTGCGGA TAATCGTTTG GAGAACAATC CCTGGCACGG GTATGATGAT CTGGCACTTA AGGAGGAAGT AAGCAAGCTT ATAAGTGCAA CACTCGGAGA ACGGGAAAGG GAGATCATAC GATTATACTA TGGTCTAGAC AAAGAATGTC TCACATGGGA AGACATTAGC AAACGGATAG GATTATCGAG AGAGAGGGTA AGACAGGTAG GGCTTGTGGC ACTGGAGAAA CTAAAACACG CAGCGAGGAA GAGAAAAATG GAAGCAATGA TCCTCAAGAA TTGATTTTGT TTTTGTACAT TTTGATTACA TCAGAGCCAT AGAGAGCGGT |
| Length | 1580 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 7084358.. 7086704 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G64860.1 |
| Description | sigma factor A |
| TAIR curator summary | Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme |
| Alias | [RPOD1][SIG1][SIG2][SIGA][SIGB][RNA POLYMERASE SIGMA SUBUNIT 1][RNApolymerase sigma subunit 2][sigma factor A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11 |
Ahg938526 | sedoheptulose-bisphosphatase |
| 11.6189 |
Ahg481283 | aldehyde dehydrogenase 11A3 |
| 13.1909 |
Ahg482998 | rubisco activase |
| 21.4476 |
Ahg924950 | 2Fe-2S ferredoxin-like superfamily protein |
| 23.8328 |
Ahg476582 | Pyridine nucleotide-disulphide oxidoreductase family protein |
| 24.2487 |
Ahg490862 | Acetamidase/Formamidase family protein |
| 24.7386 |
Ahg478862 | Aldolase-type TIM barrel family protein |
| 26.9815 |
Ahg489169 | photosystem II stability/assembly factor, chloroplast (HCF136) |
| 27.6586 |
Ahg471925 | Translation initiation factor 2, small GTP-binding protein |
| 27.8209 |
Ahg935733 | chloroplast signal recognition particle component (CAO) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|