Detail


ID : Ahg926970

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926970|scaffold_202531.1
Sequence
ACTAAGTAGT AATAATCATC ATGGCTAAGT TTGCTTCCAT CATCACCCTT ATCTTCGCTG CTCTTGTTCT CTTTGCTGCA TTTGAAGCAC CAACAACTGT GGAAGCACAG AGGTTGTGCG AGAAGCCAAG TGGGACATGG TCAGGAGTTT GCGGAAACAA TGGCGCGTGC AGAAATCAGT GCATTAGACT TGAGGGAGCA CGACATGGAT CTTGCAACTA CGTCTTCCCA GCTCATAAGT GTATCTGTTA CTTCCCATGT TAATTTACCT AAAAATCTTT TGT
Length283
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15927502.. 15927876
Download Sequence
A.thaliana
AGI-codeAT2G26020.1
Descriptionplant defensin 1.2b
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Alias[PDF1.2b][plant defensin 1.2b]
Gene coexpression
MR
MR Locus Description
2 Ahg477741 pathogenesis-related 4
3.16228 Ahg483470 Chitinase family protein
5.47723 Ahg945809
5.91608 Ahg488005 NADP-malic enzyme 2
6.9282 Ahg330953 plant defensin 1.3
10.247 Ahg348799 beta-1,3-glucanase 3
10.4881 Ahg922451 Leucine-rich repeat (LRR) family protein
13.4164 Ahg334804 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
15.748 Ahg340627
15.8745 Ahg480170 glycine-rich protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression