Detail



ID : Ahg927054

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927054|scaffold_202615.1
Sequence
TTTTTTTTGA GAGAGTAGAG AAATGGGTGA GGTAGGTCCT CAAGTTGCTG CTCCGATTCC AGTTCACCAT CCTATGAGGA AAAAACGCGA ACTTTATTCA CAACCACACT GGATTGTGTC ATCTCAGCTA CCGAGGGAGG ATGATTGGCA TATCAACAAG TGGAAGTGGG ATAGTCAGAG ATTTGAAGCT ATAGAACTTC AAGGAGAGAC TCTCCAGCTT GGTGGTAACA ATAACAACGG TGGTTTGAGT TATAAAGGAG AAGAAAGAGG CCTTGATTTG AATCTACCTA GTGGTTTTAA TGATTTGGAA GACACGCCGG TGGATTTAAC CAGACCTAGT AAGAAGGTTA GGTCGGGATC TACGGGAAGT GGCGGCGGAG GAGGAGGAGG AAACTATCCA AAGTGTCAGG TTGATAATTG TAAGGAAGAT TTATCAATTG CTAAGGATTA TCATAGAAGA CATAAAGTAT GTGAGGTTCA TAGCAAAGCT ACTAAAGCTC TTGTTGGGAA ACAGATGCAG AGGTTTTGCC AACAGTGTAG CAGGTTTCAT CTGCTTTCTG AGTTTGATGA GGGGAAGAGA AGTTGTAGGC GTAGATTGGA TGGCCATAAC AGGCGGAGGA GAAAAACGCT GCCCGATGTG ATTACGTCTC AGGTTGTAGC TCTCGAGAAT CGTGATAATA CTTCTAATAA CGCTAATATG GATGTTATGG CTTTGTTAAC GGCTTTAGTT TGTGCACAAG GTAAGAACGA GGCTATTACT AATGGGTCTC CGGGAGTGCC TGATAGAGAG CAGCTTCTTC AGATACTTAA CAAGATCAAG GCTTTACCTT TGCCTATGGA TCTTGCCTCA AAGTTGAACA ATATCGGAAT TTTAGCCAGG GAAAATCCGG ATCAACCTTC CGCGATGAAC CCTCAAAATA GTATGAATGG AGCTTCTTCT CCATCTACCA TGGACTTACT TGCTGCTCTC TCGGCAACTT TAGGTTCATC TGCTCCCGAG GCCATAGCTT TTTTATCTCA AGGAGGGTTT GGTAACAAAG AAAACAATGA TAGTACTAAG TTAACTTCTT CTGACCACGG CGTTACAACC AATGTAGAAA AGAGAACTTT GGAGTTTCCT TCTTTTGGGA GAGGAGAGAG GACAAGTAGC AGTAAACATT CTCCTTCTCA GGATTCAGAT TCACGCGGTC AGGACACGAG ATCTAGCTTA TCTTTACAAC TATTCACCTC TTCACCAGAG GATGAGAGTC AACCAACAGT TGCATCTTCA ACAAAGTATT ATTCTTCTGC GAGCAGTAAC CCTGTTGAGG ATAGATCTCC ATCATCGTCT CCGGTCGTGC AAGAGTTGTT CCCTTTGCAT ACTTCTCCTG GAACCAGGAG GTCTAACAAT TACAAAAACA CTAGTCCCAT CCCCAGGACC AGTTGTTTGC CCCTAGAGCT CTTTGGTGCA TCAAACAGAG GAGCTACTGC AAATCCTAAT TCCAATGTTT CTAGGCATCA ATCTGGTTAT GCTTCATCTG GTTCGGATTA TTCTCCTCCT AGCTTAAACT CTGATGCTCA GGACCGCACC GGAAAGATCA TTTTCAAACT ATTTGAAAAA GATCCTAGTC AGCTCCCTGG CACATTGCGA ACCGAGATTT ATAGATGGCT TTCTAGCTTT CCATCAGAAA TGGAGAGTTA TATCAGGCCT GGTTGTGTTA TCTTATCTGT CTATGTGGCA ATGTCAGCTT CTGCTTGGGA ACAACTCGAG GAAAATTTAC TGCAACGGGT TAGTTCTTTG GTTCAAGATT CAGATTTTTG GAGGAATACA AGATTTTTGG TCAATACAGG CAGACAGCTC GCATCACACA AACACGGTAG AATTCGTCTG AGCAAATCTT GGAGAACTTT GAATTCACCA GAACTGATCA CGGTGTCGCC GTTGGCTGTT GTAGCCGGTG AAGAAACAGC TTTGATAGTA AGGGGTAGAA ACTTGACCAA TGACGGAATT AGACTTCGTT GCGCACATAT GGGTAACTAC ACGTCAATAG AGGTAACTGG AACAGAACAT AGGCGAACAA AATTTGATGA GTTAAACGTT AGTAGTTTCA AAGTCCAGAG TGCAAGCCCT GTTTCTCTAG GACGCTGTTT CATTGAGGTG GAGAATGGAT TCAGAGGTGA CAATTTCCCT TTGATAATAG CCAATGCCAC GATTTGCAAA GAGTTGAATT GCCTTGAAGA CGAGTTTCAT CCAAAAGACG TGATAGAGGA ACAGACACAG AACTTAGATC GTCCAAGATC AAGAGAAGAA GTTATTTGCT TCTTGAATGA GCTCGGTTGG CTATTTCAGA GGAAATGGAC ATCCGATATT CATGGAGAAT CTGACTTTTC TCTTCCCCGC TTCAAATTTT TGCTTGTATG CTCTGTTGAA AGAGATTGCT GTTCTCTCAT AAGAACTGTC CTGGATATGA TGGTAGAGAG AAATTTGGGA AAAGATGGTC TGATGAACAA GGAGTCCTTA GATATGCTGG CTGAGACTCA GCTATTGAAT CGCGCTGTCA AAAGGAGAAA TACAAAAATG GCTGAAACGC TGATTCATTA CTCCGTTAAT CCGTCTACTA AAAACTTCAT CTTCTTGCCT AATATCGCTG GACCTGGTGA TATCACACCT TTGCATTTGG CTGCTTCCAC ATCTGGTTCT GATGATATGA TTGATGTACT GACTAATGAT CCACAAGAGA TTGGATTATC TTGTTGGAAT ACCCTAGTTG ATGCATCCGG GCAGACTCCA TTTAGGTATG CTGCAATGAG AAACAACCAC AGTTACAACA CCTTGGTGGG TCGTAAACTT GCAGATAAAA GAAACGGGCA AATATCTCTG AACATTGAAA ATGGGATCGA TCAGATTGGT CTGAGTAAGA GACTAAGCTC AGAGCTAAAG AGATCTTGCA ACACATGTGC AAGTGTGGCT CTAAAGTATC AGAAGAAGGT TTCGAGTTCA CGTCGTTTGT TCCCAACTCC GATCATCCAC TCGATGCTTG CTGTTGCGAC AGTCTGCGTT TGCGTCTGCG TGTTTATGCA TGCTTTCCCA ATCGTCAGAC AAGGCTCTCA CTTCAGTTGG GGTGGTCTTG ATTACGGTTC AATCTAAGGT TTGCTATATA ACTAAGT 
Length3147
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16248963.. 16252911
Download Sequence
A.thaliana
AGI-codeAT1G76580.1
DescriptionSquamosa promoter-binding protein-like (SBP domain) transcription factor family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus3947
2.44949 Virus0819
3 Ahg949811
4.89898 Ahg947868
6.32456 Ahg926438 Cytidine/deoxycytidylate deaminase family protein
7.07107 Ahg948991 C2H2 and C2HC zinc fingers superfamily protein
7.74597 Ahg326112 Transmembrane amino acid transporter family protein
8.12404 Ahg903313 Class I glutamine amidotransferase-like superfamily protein
8.12404 Ahg949368
11.1803 Ahg946603
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression