Detail



ID : Ahg927080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927080|scaffold_202641.1
Sequence
AGAGTATCTC TGTCTACACA ATGTCCGGCG AGGAAGACGC CACCGTGAGG GAGCCACTAG ATCTGATTAG GCTGAGTCTC GACGAGAGAA TCTATGTCAA GCTCCGGTCA GACCGCGAGC TTCGCGGCAA GCTTCACGCG TTTGATCAGC ATTTGAATAT GATTCTGGGT GATGTTGAAG AAACTATCAC AACAGTAGAA ATCGATGACG AGACATATGA AGAGATTGTT CGGACTACAA AGCGGACGAT TGAGTTTCTA TTTGTGAGAG GAGATGGAGT GATATTGGTG TCTCCACCGC TGAGGACAGC AACCTGAGTT AAAACTCAAA TCTTTTGT 
Length338
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16366975.. 16368043
Download Sequence
A.thaliana
AGI-codeAT1G76860.1
DescriptionSmall nuclear ribonucleoprotein family protein
TAIR curator summary
Alias[LSM3B][SM-like 3B]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg495124 SUMO-activating enzyme 1B
6.32456 Ahg474164 Calcineurin-like metallo-phosphoesterase superfamily protein
7 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
9.21954 Ahg488258 Thioredoxin superfamily protein
11.4891 Ahg931123 Polymerase/histidinol phosphatase-like
12.8452 Ahg913002 DEA(D/H)-box RNA helicase family protein
13.8564 Ahg345419 zinc finger (C2H2 type) family protein
15.2971 Ahg482061 embryo defective 1381
18.1659 Ahg473241 TEOSINTE BRANCHED 1, cycloidea, and PCF family 24
19.3391 Ahg936712 pectin methylesterase 31
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression