Detail



ID : Ahg927204

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927204|scaffold_202765.1
Sequence
GTGAGCTTAG GTTGCAGTGT CGATGGTAAA TCTCCTCTCC TTCCGTTCCG TCGGCGTTCA TCTTCTCCGA CATGCTACGC CGATCATAAC CCGAGGCGGA AGAATCTCGA AACCCATCTC GAAAAATCTC TGCTTTGTCT TATTCTCTTC GTCTCCTAAA ACCTCTCTTC TTAAACCTCG CGCTGCGTCA TCAGAGGACA ATTCTCTTGT GTTTAGAGGC GATGAGCGTG TGGTGGGTCT TGTGGGCAAG GTAGTAGACG ATGCATTCGA TGACGTCGAT AGGTTTCAGA GCTCAAGTAC AATTGTGGCG ATTGTAACAC CGATTGGTGG ACCACCTGGT GCGGTGGGAA TCGTGCGGTT GTCGGGACCT AAGGCTGTGG AAGTTGCAGG AAGAGTCTTT CGTTCTGCTA AGAAAAGGAA GAAGAAGGAC TCGGATTCGG ATTCATGGCA GCCCAAGAGT CATTTCGTGG AATATGGAGT TGTTGTTGAT TCACATGGCA ATGTTGTTGA CGAGGTTTTA GCTGTGCCTA TGTTGGCTCC TCGGTCATAC ACTCGAGAAG ATGTAGTTGA GCTCCAATGT CACGGGAGCG AAGTTTGTCT GCGGCGTGTT TTGAGGACGT GTGTTGAAGC TGGAGCACGA TTAGCAGAAC CAGGAGAGTT TACACTTCGT GCCTTTCTAA ATGGGCGTTT AGACCTTTCG CAAGCTGAAA ATGTCGAAAA ACTTATTTCG GCCAAGTCTT CTGCTGCTGC TGATGCTGCT TTGGAAGGGA TTCAGGGAGG GTTTTCATCT TTGGTCAAAT CATTAAGAGC ACAATGCATT GAGCTCCTCA CTGAAATTGA AGCTCGTTTA GACTTTGAGG ACGAGATGAC GCCATTGGAT ATAGAGTCAG TTATTAACAA AATAAACAGC ATGTCTCAAG ACGTAGAAAG TGCATTAGAA ACAGCAAACT ACGACAAGCT TCTTCGAAGC GGATTGCAGA TAGCTATTGT TGGGCGTCCG AATGTTGGGA AATCAAGTCT TCTAAATGCC TGGAGCAAAA GTGAGAGAGC CATTGTTACA GAAGTTGCTG GAACTACTCG AGACGTTGTG GAAGCTAATG TTACAGTCCG TGGCGTTCCT ATCACACTTC TTGACACTGC TGGTATCAGA GAAACCAATG ACATTGTCGA AAAAATAGGA GTTGAAAGAT CAGAAACAGC TGCTAAGGTT GCTGATGTCA TAATCATGAC GGTGAGTGCT GTTGAAGGCT GGACTGAAGA AGACACTGAG CTTTTACGTA AGATCCAATC AGACAAGCCT ATGATTCTGG TGATGAACAA AATTGATTGT GCTCCTCTTA GTAGCTGTGA TCAACTAGAG GATCAGAGGA AAAAGGAAGA AGTTTTCCAT AAGTCTGTCT TCACATCTGC TGTTACTGGT CAAGGACTTG AAGAGCTTGA GGATGCAATA TTGGAGATTC TTGGTCTTGA TCGTGTCCCT ACTGGAGGAC ATCAATGGAC AGTGAATCAG AGACAATGCG AGCAATTGGT GCGGACGAAA GAAGCGCTAG CGAGGCTGAG ACAAGCGATA GAAGAAGAGA TTCCGATTGA TTTCTGGACG ATCGAGCTGA GAGAAGCTGC TTTGGCTCTT GCTCAAATCA GTGGCCAAGA TGTCTCTGAA GAGGTCTTAT CCTCCATTTT TGCTAAGTTT TGTATCGGTA AATAAATCAG TTGCCACTTA ATTCA 
Length1725
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16914192.. 16916965
Download Sequence
A.thaliana
AGI-codeAT1G78010.1
DescriptiontRNA modification GTPase, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.9642 Ahg927786 Plant protein of unknown function (DUF827)
17.8326 Ahg496470 RAC-like 10
18.3848 Ahg478735 Lysyl-tRNA synthetase, class II
23.1084 Ahg925455 ribosomal protein L20
24.1661 Ahg473892 RNA-binding protein 47C'
24.96 Ahg935936 Major facilitator superfamily protein
27.8209 Ahg487232 3'-phosphoinositide-dependent protein kinase 1
28.9828 Ahg488286 Surfeit locus protein 2 (SURF2)
40.398 Ahg489803 cytosolic invertase 2
45.5631 Ahg351368 SWIB/MDM2 domain;Plus-3;GYF
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression