| Annotation |
|---|
| Description | jgi|Araly1|927299|scaffold_202860.1 |
| Sequence |
TCAAAAACCC TAACGCTCTG AGCTCGATCG ACAAGTGATA ATGGCCAACA GTAATTTGCC GCGAAGAATC ATCAAGGAAA CTCAACGTCT GCTCAGTGAA CCGGCTCCCG GTATAAGTGC CTCTCCATCT GAGGATAATA TGCGGTATTT CAATGTTATG ATTCTTGGTC CTTCACAATC ACCTTATGAA GGAGGAGTTT TCAAGTTGGA GCTCTTTTTG CCTGAAGAAT ACCCTATGGC AGCTCCCAAG GTTAGGTTTC TCACAAAGAT ATACCATCCT AACATTGACA AGCTTGGAAG AATCTGTCTT GATATTTTGA AGGACAAATG GAGCCCTGCA CTACAAATAC GAACAGTGCT CTTAAGTATT CAAGCTCTTC TGAGTGCACC AAACCCAGAT GATCCGCTGT CTGAGAACAT TGCTAAGCAC TGGAAGAGTA ATGAGGCAGA AGCTGTGGAG ACAGCCAAAG AATGGACCCG CCTTTACGCA AGTGGCGCAT AATGGATTGG AGGGTGAAAA GATCT |
| Length | 525 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17336977.. 17338917 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G78870.1 |
| Description | ubiquitin-conjugating enzyme 35 |
| TAIR curator summary | UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. |
| Alias | [UBC13A][UBC35][UBIQUITIN CONJUGATING ENZYME 13A][ubiquitin-conjugating enzyme 35] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.247 |
Ahg909946 | beta glucosidase 11 |
| 11.6619 |
Ahg946493 | DWNN domain, a CCHC-type zinc finger |
| 12.49 |
Ahg477510 | NC domain-containing protein-related |
| 16.6132 |
Ahg918538 | folate transporter 1 |
| 27.6586 |
Ahg479051 | NUP50 (Nucleoporin 50 kDa) protein |
| 31.749 |
Ahg480728 | pyrophosphorylase 2 |
| 32.8481 |
Ahg926183 | magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases |
| 35.2136 |
Ahg922049 | prefoldin 6 |
| 35.8887 |
Ahg494587 | Calcium-binding EF-hand family protein |
| 40.2989 |
Ahg494934 | Sterile alpha motif (SAM) domain-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|