Detail


ID : Ahg928432

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928432|scaffold_300889.1
Sequence
CGACTTTGTT TGCTCCTCCG ATGGATTCAG CTCGAGAGGT CAGCGATGGT AGACTCACCG TTGAGGGTTT CTCTGTAGCT GCTCGAACTT TTGCCGATAA GTGGAAGATA CATAACCAAT CGTTCCCTCC ATGGTCTTGG GTTCCTCTGA TCAATCGAAC TCTACTTGTC TCAAAGAAGC AGGAGGAAGG TTACTTGTCG CTGGAGAAGA TCATCATTCT CAGTTCACTT GAGGAAATTC CGGAGGATGA ATCTCTAAAT GTCGCAACTG ATTGCTCGGA AAAAGAAGAA TCAATTGATC ACACGATCTT GGTCCCAACC CTGGAAAATG AAGCACACTA CTATGATTTC CATATAGTTT ACAGTGCTTC ATACAAGGTT CCTGTGCTAT ATTTTCGCGG ATACTGCAGC GGTGGACAAC CCCTTGCTTT GGATGTCATA AAAAAAGATC TGCCCTCATG CTCTCTTAGT CTTTTGCTGG AATCTAAGTG GACATTTATA ACTCAGGAGG AGCACCCATA TTTAAACAGG CCATGGTTCA AGCTACATCC CTGTGGGACT GAGGAATGGA TCAAGCTGCT TTCTCAAAGT AGCAGCTCTT CTGGATGTCA TATGCCAGTT GAGTTGTACT TGGTCTCATG GTTCTCTGTT GTCGGGCAGG TGGTTGGTCT TAGGACCCCT CTTCAGATGC TGAATTAGGA ACCATCTTCT GTTATCAA
Length718
Protein Sequence
Protein Residue
Map Locationscaffold_3: 2973805.. 2974957
Download Sequence
A.thaliana
AGI-codeAT3G07525.2
Descriptionautophagocytosis-associated family protein
TAIR curator summaryEncodes an E1 ligase involved in autophagic vesicle formation.
Alias[ATATG10][ATG10][autophagy 10]
Gene coexpression
MR
MR Locus Description
32.4037 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
41.7852 Ahg494249 alpha/beta-Hydrolases superfamily protein
42.5676 Ahg327340 Sec1/munc18-like (SM) proteins superfamily
46.4327 Ahg943584
47.7493 Ahg482441 maternal effect embryo arrest 22
50.1996 Ahg894515 indole-3-acetic acid inducible 28
56.4978 Ahg490342 sucrose synthase 3
57.5847 Ahg492720 oxidoreductase, zinc-binding dehydrogenase family protein
59.6992 Ahg486640 alpha/beta-Hydrolases superfamily protein
61.6279 Ahg898991 RWD domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression