Detail



ID : Ahg928811

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928811|scaffold_301268.1
Sequence
GACGTGGTTC TGAAACTGTA TGAAGCCCTG AGATCTCGCG ACGTTAAATC TGTGCACCAG ATCTTAACCC CAGATCTGGA GTATTGGTTC CACGGCCCTC CGCCGCACCA GTTTTTGATG CGCGTACTCA CCGGAGGTGT CTCTCCGTCT TCCTCCTCGT TCGAATTCGT ACCTCTCTCC GTCGTTTCGT TCGGATCTAC CGTAATCGCA GAAGGCTGCG ACGCCGCGAC CTCGATTTCT TGGATCCACG CTTGGACCGT AGCGAATGGG ATAATCACAC AGGTGAGGGA GTACTCTAAC ACTTCTCTCA CCGTCACACG GATCGGTAAC GTTGTTGCTG GACGACGCTC TGCTGAGATT GCGCCGTCGC ATTGTCCCTC CGTGTGGGAA AGCCAATTCT CGGGTCGGGC TGGTAAATCC GTACCCGGTT TGGTTCTGGC GATTTGAAAC AATTTGGTAA AGTAAGT 
Length467
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4157011.. 4157477
Download Sequence
A.thaliana
AGI-codeAT3G10985.1
Descriptionsenescence associated gene 20
TAIR curator summaryA senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.
Alias[ATWI-12][SAG20][WI12][ARABIDOPSIS THALIANA WOUND-INDUCED PROTEIN 12][senescence associated gene 20][WOUND-INDUCED PROTEIN 12]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg496172 aleurain-like protease
5.2915 Ahg484422 Tetratricopeptide repeat (TPR)-like superfamily protein
5.38516 Ahg488679
6.7082 Ahg476384 Protein of unknown function (DUF1677)
7.61577 Ahg492259 conserved peptide upstream open reading frame 12
7.74597 Ahg911192
8.12404 Ahg488204 pheophytinase
9.16515 Ahg472192 Wound-responsive family protein
9.79796 Ahg939877 Duplicated homeodomain-like superfamily protein
10.3923 Ahg950146 Translation initiation factor SUI1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression