Detail



ID : Ahg929053

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929053|scaffold_301510.1
Sequence
ATCCAAAATC AGAACGCGAT TCCATGGCCT CCGGCAAAGA TTCCGACCGT AACCTAGGGT ACATGACCCT GAAGGATGCG GAAGTGAAGC TTCCACGGAC GACGCGAGTC AAGAACAAGA CTCCGGCGCC GGTCCAAATC ACCGCGGAGC AGATTCTAAG GGAGGCTCGA GAGAGGCAAG AGCCTGAGAT CCGTCCGCCT AATCAGAGAA TCACTGAATC GACTGAGCTT TCCGACTTCA GACTCCGACG TCGGAAGGAT TTTGAGGACC AGATCCGCCG TGCGAGATTG AATACCCAAG TTTGGGTCAG ATATGCGCAG TGGGAAGAAT CGCAGATGGA TTACAAGCGT GCTCGAAGCG TGTGGGAACG AGCCTTAGAA GGAGAAGCTT ACCGGAGCCA CACGCTCTGG GTCAAGTTCG CCGAGTTTGA GATGAAGAAC AAGTTTGTCA ACGAAGCGAG GAACGTTTGG GATCGTGCTG TTACGATCCT CCCTCGAGTA GACCAGCTTT GGCGCAATTA TATCCACATG GAAGAGAAAC TTGGGAATAT TGCCGGAGTT AGAGAGATAT TCGAGCGGTG GATCGATCGG TCACCGGATC AACAAGCTTG GCTCTGCTTT ATCAAATTCG AACTTAAGTA TAATGATATC GAACGTGCAA GATCCATTTA CGAGAGATTT GTTCTTTGTC ATCCAAATGT TTCTGCTTAT ATTCGATATG CAAAGTTTGA GATGAAGCGT GGTCAAGTTG AGCTCGCTAG GAAAGTGTTC GAACGCGCCC AGAAGGAGCT TGCAGACGAT GAAGAAGCTG AGATTCTCTT TGTGGCGTTT GCTGAATTTG AAGAACAATG CAAGGAAGTA GAGCGAGCTA GGTTTATCTA CAAGTTTGCT CTTGATCAGA TTCCTAAAGG AAGAGCTGAA AATTTGTACA GCAAGTTTGT GGCGTTTGAG AAACAGAATG GGGATAAGGA AGGGATTGAG GATGCCATTA TTGGGAAGAG GAGGTTTCAG TATGAAGATG AAGTGAGTAA GAACCCTTTG AACTATGATT CGTGGTTCGA TTACCTTAGG TTAGAAGAGA CTGTTGGGAA CAAAGATAGG ATAAGAGAAA TATATGAGAG GGCTATTGCT AATGTTCCAC CTGCTCAAGA GAAACGATAC TGGCAAAGAT ACATATATCT TTGGATTAGT TATGCTTTGT ATGAAGAGAT TGAAACTGAA GATGTGGAGC GTACCCGAGA TGTTTACAGA GCATGCCTCA AGCTTATCCC CCACACCAAA TTTTCTTTTG CCAAAATATG GTTGCTCGCT GCACAACATG AAATCAGGCA ATTAAATCTC ACGGGTGCAC GACAGATATT AGGAAATGCG ATTGGGAAAG CTCCAAAAGA GAAGATATTC AAGAAATACA TTGAGATCGA ACTCCAGTTG GGAAATATAG ATAGATGTAG AAAGTTATAC GAGCGGTATC TTGAATGGTC TCCTGAGAAT TGCTATGCTT GGAGAAACTA TGCTGAGTTT GAAATGTCTC TTGCTGAAAC AGAACGAGCT AGAGCTATCT TTGAACTTGC AATATCTCAG CCTGCTCTAG ACATGCCCGA GCTGCTATGG AAGACGTACA TTGATTTTGA GATATCAGAA GGGGAATTAG AGAGGACACG GGCTTTATAT GAGAGACTCT TGGACCGTAC AAAACATTGC AAGGTGTGGG TTAGCTTTGC AAAGTTTGAA GCTTCTGCTG CGGAACACAA AAAAGACGAG GAAGAAGAAG ATGCTATTGA ACGCAAAAAA GACGACATCA GACGCTCCAG AGCGATCTTC GATAGAGCCA ACACATACTA CAAAGACAAA ACACCAGAGC TGAAAAAAGA GCGTGCTATG CTTTTGGAGG ATTGGCTTAA CATGGAGACG GGCTTTGGTA TGCTCGGGGA TGTTAGTGTC GTTCAATCGA AACTCCCGAA GAAGCTCAAG AAGAGAAAGC TGAGCAGTAG AGAAGATGGC TCTACCGAGT ATGAAGAATT CATTGATTAT TTGTTTCCAG AAGAATCACA GACGACGAAT CTTAAGATTG TTGAAGCTGC TTATAAATGG AAGAAGCAGA AGGTTGTTAA AGCTGGGGAA TGCGTCTAGA GCGGTTAACA TAATGGTGT 
Length2149
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5030577.. 5033463
Download Sequence
A.thaliana
AGI-codeAT5G41770.1
Descriptioncrooked neck protein, putative / cell cycle protein, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.7648 Ahg489738
15.7162 Ahg474768
17.2627 Ahg355042 pleckstrin homology (PH) domain-containing protein
17.8606 Ahg934690 SAC3/GANP/Nin1/mts3/eIF-3 p25 family
18.4932 Ahg322854 glucose-6-phosphate dehydrogenase 5
25.3377 Ahg475532 ARM repeat superfamily protein
32.078 Ahg340908 glucan synthase-like 10
35.4119 Ahg479083 mitotic phosphoprotein N' end (MPPN) family protein
36.2215 Ahg473502 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
36.9324 Ahg893068 embryonic flower 1 (EMF1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression