Detail



ID : Ahg929203

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929203|scaffold_301660.1
Sequence
AGTTTTAATC TGAAGCCACC ATGTGTGGAG GAGCTATAAT CTCCGATTTC ATTCCGCCGC CGAGGTCCCT CCGTGTCACT AGCGAGTTTA TCTGGCCGGA TCTGAAAAAC AAAGGGAAAA AAGCTTCGAA GAAGAGATCG AATAAGCGAC CCGATTTCTT CGATCTGGAC GATGAATTCG AAGCTGATTT CCGGGGGTTT AAGGATGACT CGGCTTTTGA CTGCGAAGAC GAAATCGATG ATGGTGTCTT CGTCAATGTG AAGCCTTTTG TCTTCACCGC AACTACTAAA CCCGTAGCTT CCTCTGTCCC CGTTTTCGCA TCCACTGTAG GATCAGCATC TGCCAAGAAA ACTGTAGAGT CCGATGGGCA AGCTGAGAAA TCTTCTAAGA GGAAGAGGAA GAATCAATAC CGAGGAATTA GGCAGCGCCC CTGGGGCAAA TGGGCTGCTG AGATCCGTGA TCCGAGAAAA GGCTCCCGAG AATGGCTTGG AACATTCGAC ACTGCTGAGG AAGCAGCAAG AGCTTATGAC GCAGCAGCAC GCAGAATCCG AGGCACGAAA GCTAAGGTGA ATTTCCCAGA GGAGAAGAAC CCTTCCGTCT CCCAGAAACG TCCTACTGGT AAGACCAATA ATCTTCAGAA ACCAGTGGCT AAACCAAACA AAAGCGTAAC TTTGGTTCAG CAGCCAACAC ATCTGAGTCA GCAGTACTGC AACAACTCCT TTGATAACAT GGGGAATGAC TCCTTTGGTG ATATGAGTTT CATGGAAGAG AAGCCTCAGA TGTACAACAA TCAGTTTGGG TTAACAAACT CGTTCGATGC GGAAGGTAAT AATGGATTCC AGTATTTCAG TTCCGATCAG GGAAGTAACT CATTCGACTG CTCTGAGTTC GGGTGGAGTG ATCACGGCCC CAAAACACCT GAGATCTCTT CAATGCTTGT CAATAACAAC CAAGCACCAT TCGTTGAAGA AACCAATGCA GCAAAGAAGC TCAAACCCAA CTCTGATGAT TCAGACGATC TGATGGCATA CCTTGACAAC GCCTTATGGG ACACTCCACT AGAAGTGGAA GCCATGCTTG GTGCAGATGC TGGTGCTGTG ACTCAGGAAG AGGAAAACCC AATGGACGTA TGGAGCTTAG ATGAGATCAA TTTCATGCTG GAAGGAGACT TTTGAAGTGA TCGATGGTTC CTTAGCTTGT AAATAAAGCT GTGTGTTGGA TTCTGCTGTT GGGGGGTGGT ACAAGTCACA CTTGAAGCTC GTTGCATTGG TTTCTTATGA GTCTCTCTTT TAATTTTGTT GAAATAAAAA GGTGTGATGA AGTAAATAGA GGTGTAATAT CTATCTAATG AGTCTTGTTT CCTTCATTTT TTGTTTTTCT TTCTATTTAA AAGACAGTTT ATTTAATCTT CTGAGCTATC TTT 
Length1423
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5605852.. 5607911
Download Sequence
A.thaliana
AGI-codeAT3G14230.1
Descriptionrelated to AP2 2
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.
Alias[RAP2.2][related to AP2 2]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg474784 Dormancy/auxin associated family protein
8.12404 Ahg474479 mitogen-activated protein kinase 18
8.3666 Ahg920198 related to ABI3/VP1 1
9.94987 Ahg482337 Dormancy/auxin associated family protein
10.9545 Ahg471773 Transducin family protein / WD-40 repeat family protein
12.8452 Ahg319530 maternal effect embryo arrest 14
12.9615 Ahg486874 Leucine-rich repeat protein kinase family protein
13.3041 Ahg470588 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.7477 Ahg483087 PYR1-like 6
17.4929 Ahg921733 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression