Detail


ID : Ahg929588

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929588|scaffold_302045.1
Sequence
AAGCTAGTAC TCGATCTACC ATGTCCCGAA ACGTTCCGAG AATCGAGATG CCGGAATCAG AAGAAAACGA GTTCGCGAGC TTGTCTTTGT TTTCGCCTTC AAGAGCTCCT CTGAATTCGA TACCGGATCC AAGTCAAATT CAGAAGGCGA ATCATCTACC CGATTTCGAT TTGGTTCAGA AATTGGAAGG TACAAGAGCG CAGCATCAAC GAACACTGGG TCCGGAGAAG AGACTCGAAG TTTTGGAAGG TAGAGCTGGA AATTCGAGTG ATTCGAACCC TAAGATTGTT AATCGTAATG GAAAATCTCG GTCGGAGCCA AACTCTGCGC AGAGTACGCC CACTAGGAAC GGTGCTAGGG TTTCTCTTGG AGGGGGTTGT GCTACCGGCG CAAGAGTTGT TCAGTCTTTC GGTGGAAGAG GAAGGATTCC AAGGGGGATT TCTATGGCGG AGTCTGTTAG CTTTGCGGAA ACAACTCCAC ATTTTGAGCT CAATGAAGAT CATTCGTTTT GGAAAGAGCA CAATGTCCAG GTTTTGATAA GGCTGCGGCC ATTAAGTACA ATGGAAAGGG CTAGTCAAGG ACATGGTAGG TGTTTAAAAC AGGAGAGTCC ACAAACATTG GTCTGGTTAG GCCATCCAGA GACCAGATTC ACCTTTGACC ATGTTGCCAG TGAGACAATA TCTCAGGAAA AGTTATTTCA CGTTGCTGGA CTCCCCATGG TGGAGAATTG CTTGTCTGGT TACAATAGTT GTGTGTTTGC CTATGGTCAG ACTGGTAGTG GCAAGACTTA TACTATGATG GGAGAGATAT CTGAGGCAGA GGGAAGCCTC GGTGAAGACT GCGGAGTTAC TGCTCGTATT TTTGAGTATC TATTCTCAAG AATTAAATTG GAAGAAGAGG GAAGGCGAGA TGAAAAACTG AAATTCAGTT GCAAATGTTC TTTTCTTGAG ATATATAACG AACAGATAAC TGACCTCTTG GAACCATCAT CAACCAATTT GCAACTCAGA GAAGACTTGG GAAAAGGAGT ATATGTTGAA AATCTTGTAG AGCACAATGT GAGAACTGTT AATGATGTTC TAAAGCTTCT ACTACAGGGA GCAACTAACC GGAAGATTGC TGCAACCCGT ATGAACAGTG AAAGCAGCAG ATCCCACAGC GTTTTCACAT GTACAATCGA GAGCCTCTGG GAGACAGATT CTCTAACTCG TTCAAGATTT GCCAGACTAA ACTTGGTCGA TTTGGCTGGT TCTGAAAGGC AGAAAAGCTC AGGTGCGGAA GGGGATCGCC TAAAAGAAGC AGCAAACATT AACAAATCCT TATCCACTTT GGGCTTAGTG ATAATGTCTC TGGTGGATTT GGCACATGGG AAACATAGAC ATGTTCCCTA TAGAGATTCT CGACTTACCT TTTTACTGCA GGATTCTCTA GGGGGTAACT CCAAAACAAT GATAATAGCT AATGTCAGCC CATCTCTTTG CTCTACAAAC GAAACCCTCA GCACCCTGAA GTTCGCGCAA CGGGCAAAAC TAATCCAGAA TAATGCTAAA GTCAATGAAG ATGCCTCTGG GGATGTTACA GCACTCCAAC AGGAAATAAG AAACTTAAAG GTCCAACTGT CTTCTCTTTT GAAGAACCAT GACTCTTGTG GGGCTCTTTC AGACTGCGTA TCTTCTCATG AAGAATCCAG ATACTCTGGC ACATGTAAAG TAGCAGGCGA AACAAGACAA GACAAATGTC ACTGTCAGGT GAAAAATATG AAAGATAATT TGATTGGTGC TCTCAGAAGG GAAAAGATTG CTGAAACTGC CCTTCAGAAG TCCGAGGCTG AGATTGAGCG TATAGACTGC TTGGTTAGAG ACATGGAAGA AGATGCCAAG CGCATTAAAA TAATGCTTAA TCTTAGGGAG GAGAAAGTTG GAGAGATGGA ATTCTGTACG CCTGGTCCAT TGATGACAAA AGAGTGTCTC ATTGAAGAAA ATAAAACTCT AAAAGGAGAG ATCAAGCTTC TTCGCGACAG CATTGACAAG AATCCAGAGT TGACACGTTC GGCCTTGGAG AACACCAAGC TCTGGGAGCA GCTACAACGA TATCAGAACT TTTATGAGCA TGGGGAACGA GAGGCATTGG TTGCTGAGGT GACAAGACTA CGTGACCAGC TTCTTGATGT TCTTGAAGCA AAAGATGAGT CCTTTCCTAA ACACGAGAAC GAAATGGAAA AGGAATTCGA AGACTGCAGA AACATGAACT CTAGTTTGAT CAGAGAACTA GATGAAATAC AAGCAGGACT TGGAAGACAC TTGAATTTCG ATCAAATACA ATCCAACTTT GATGCATCTT CCACCAGTGG AGCTGAGCAG GCAGAAACAA TGCCAACTAT AAGTGAAACC CAAGAGGAGG TGGCTATTTC AGAGAGTAAA AACTATGCAC TAGTGAAGAC TGATGAGGGG ATAGACCGGT CAATCCTGCA GTTCAAGTTA GGGAAACTAA TGAAGGACCT TGAGGAGGCC AGAACACTTA ATTGTCAATA TGAAAAGGAG CATATGTCGC AGTTATCTCA ACAGGAAGAC ATTGAAGTAG TCCGTGAGCA AGTTGAGACA GAAACTGCCA GAACCATTCT TGAGTTGCAG GAGGAGGTGA TTGCTCTCCA GTCTGATTTT CAAAGAAGAA TCTGTAACTT GACCGAGGAA AATCAATCGA TGAAAAATAC TATTACTGCT AGAGAGGCAG AAATAAGAGC ACTTAACCAA GACTGGGAAA AGGGTACCTT AGAACTGACA AATTTCATCG TCGATGGGTC TAAATCCATC AAAAATGCCT CTACACAGAT TGAAAGTATA ATCTGTTCAT TTCCACAAGT GAATGCGTGG ATAGGTGATT ATGTTGAGAA GGCTGCAAAA AATTGTATAA AAAAGGAAGA AACAATTTTG CTTCTACAGA AAAGCTTGGA AGATGCACGG ATATTAGTAG CAGAGATGAA TTTGAAGCTT AATTCCTTAA AGGGCGCAAC AATTGCTCTC AACAAATTTC AACTGGGTGG CAATGCTGCA ACCACTGAAG AGGCTTTCAA CTTGAATAAT GATGTAGACA GGATGAGCAA TGAGGTAGAC ACGCTTGAGA GTGACTTAAA AGCAAAGCAG TATTCTATTC TGAAAACAGA ACGACATGCT GAAGCTGCTT TTGCTGTGAA AAAATGGCTT GCTGATTCTA GAAAGCAACA CCAAATGCTG GAAAAAGTAC AAGATCAATC AGTTAAAGAA TTTGGTACAT TAAGTTCAAT CTCTGCTTCT CCTAGTGCGG AAGGGAATGC TGATATTAGT TTGTCAAAGG ATGGATATCT AAGTGACGCA ATATATCCAA AGGGTGATGA GCTTTCAACA TCAATCTCTG AGTTTTCAAA CAGTAGATGG CAACATGATT GTGTACTCAA CGTAAAATGT CAAGGAGTTT CAAGTTCTGA ATCTGACGCT CAAGAAAGTA ATAACAAGAC TACATCAGCA GCTTTGATTG CTAAGAATGG GTCTGCACAT TGTGTTTTCT GTGGAGAGGG GAGGCAGTCA GTAGAAAAGC CATTGACTAT TATGATGGGG AGAGCAGAAA CAGAATACAA ATGCAGTAAT CCGCTTTCTT CTGAGGTATA TATGGGTCTT ATGCAGAGAA TGGATCCTGT TAGAAGTTTC TTCGATCGAT TTGAGGAAGT CAATGCTACC ATGAAAGAAG CTGATCTGAC AATATGTGAA TTAGTAAAGG CCAATGAGAA ATCAAATAAT GTTACTGAAA TGTGGCTTCA AACCCATGAA GAGCTAATGG TTAAGGAAAA GTATCTGATG GATGATCTTG AACAGGTCAA GTCTACACTA TCTGCATGTG AAGAAGAAAA TCAAATCTTG CTAAATCAAA CACACTCCAC TCTGGCTGAC ATGGAAAATT CAGTGTCTTT GCTTGAAGAA TATATACAGG AAATGAAAAG AGGAGTAGAA GAAACATTAG AGGCATTGTT TTCCCATGTC CTCTTAGCTG GAAAAGAGCT TCTCCAATTG ATTTCCAACT CAAGACCATC ACTTGAACAG ATTGTATCTG AAACCATGGA AAGAGAGTTC ACCATGTATG CAACATACCA ATGCCACATT GGGAAACTGA TCGATCAAAT TTTGGATCAG AGAAAACAGG TTATCACTCC CAACCTTTCA GGCCAACAGT CAGTGAAAAT TAATGCCATT GGGTATAATG CCGAAGATGA AGTCACTGGA AAGCAAAACA CAGCAGAGAT CGTCACAGGT TTAGAAAATG ATGAAGTTGT TCAGTCACAT GAAAGCCTAT TATATGAGAA CTTGTATCTG AAAAAGGAGA TTGAGAGAAA AGATGCTTTG TTTGAAGGCT TGCTTTTTGA TTTTAGGCTA CTTCAGGAAT CAGCATCAAA TAAAAGAGAT ATCAAGAATG AAATGGATGA GCTGTTTGAC GCACTATGCA AAGTACAGCT AGAGCTGGAG CTGAAAGCAA GTCAAGTTCA TGATCTTTTT GTTCATAATG AGAATCTTGA AAATTGCTCC ATTGACTTAA AAACGGCTTT GTTCACGTCA CAGTCAGATC TAGAGCAGGC CAAAGAGAGG ATACAAATTC TTGTGCAGCA GAATGATGAG TTAAGGGTCC TTGTTAGTGA TCTATGTACG GAAAAGCTTG CAGCTGAGGA GGGATTGGAC GAACAAAAAG ATCTTGTCAA AAGGTTGGAA AAAGAAATCC TTCACTTGAC TACTACATCA GAGAAGCAAT TGCTTTCTGC GGTCAAGTCC ATTGAAGAAA ATTTGAAAAA GACCAGCGAT GAGAAAGATC AGCTTGTTGA CGAAATATGT TCGTTGAATA ATAAGCTTGA GTTGGCCTAT GCTATAGCTG ATGAAAAAGA AGCAATTGCC GTAGAGGCTC GTCAGGAATC TGAAGCAAGT AAAATATATG CTGAACAAAA GGAAGAGGAG GTCAAGATTC TAGAAATTTC TGTTGAGGAA CTTGAGCGTA CGATAAATAT ATTAGAAAGA CGGGTGTACG ATATGGATGA GGAAGTTAAA AGGCATCGTA CCACCCAAGA TTCGTTAGAG ACAGAGCTGC AAGCTCTCAG ACAGAGATTG TTTAGATTTG AAACCTTCAC TGGCACTGTG GTCACAACCA ATGAAAGCAC AGAGGAATAT AAGAGTCACA TATCCAGGTC GACAGGGCTG CAAGGTGCGC ATAGTCAAAT ACAAGTCCTC CAGAAGGAAG TAGCAGAACA AACCAAAGAG ATTAAACAGC TAAAAGAGTA CATCTCCGAA ATCTTACTGC ATTCTGAGGC CCAAGCATCT GCTTACCAAG AGAAGTATAA AACTCTGGAG GTCATGATAC GAGACTTCAA ACTAGAAGAC TCAAGTTCGT CAGCTGCAGA GACCATATCA CATAAAACTG AGAGAAGCTC AATAAGAAGT AGAGGTTCAA GTTCACCCTT TCGATGTATA GTTGGGTTGG TACAACAGAT GAAACTGGAG AAGGATCAGG AATTGACCAT GGCAAGGGTT CGTGTTGAAG AATTGGAGTC ACTGCTAGCT GTTAAACAGA AAGAGGTTTG CACATTGAGC ACGAGGATAG CTGCAGCTGA TAGCATGACT CATGATGTAA TTCGGGATTT ACTTGGTGTG AAAATGGATA TAACCAGCTA TGCTGAGTTG ATTGACCAGC ACCAGGTCCA AAGATTGGTT GAAGAGACTC AGCAACACGC TGAAGAGATC CTGTCCAAGG AGCACGAAAT CATCAACCTG AAGAGACATA TTGATTGTCT TGTTAAGGAA AGAGAGAGTT GCATGTCAGA GTTGAACAAG AAAGATACAG ATGTTCTTGC GACACAGATA TCTTTGGACC AACTACAAGA GCGAGTTCAG TTGCTTTCTA TGCAAAACGA AATGCTTAAG AATGACAAGA GCAATTTGCT GAGGAAGTTA GCTGAACTTG ATCGAACAGT CCACGATGCA CGGGCCAGTA ACCATCGTGC TTCACAGACA ACAAAGGATA CAGTGTCATT TAAACTTGCT GATACTGATT ATACCAAGAG ACTGGAAAAC GCTCAGAAGC TTCTTTCCCA TGCTAATAAC GAATTGGCAA AGTATCGCAA AACGAGCAAT AACCATCCAT CTACAAGAAC TCAAGAACAG AGCTCTGGTA CAAGATATCG GTAAGAGTTT TTTTTTAAAG CTTCT
Length6215
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6983534.. 6993762
Download Sequence
A.thaliana
AGI-codeAT3G17360.1
Descriptionphragmoplast orienting kinesin 1
TAIR curator summaryPHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.
Alias[POK1][phragmoplast orienting kinesin 1]
Gene coexpression
MR
MR Locus Description
11.4891 Ahg491360 Transducin family protein / WD-40 repeat family protein
14.6969 Ahg485479 Tetratricopeptide repeat (TPR)-like superfamily protein
15.5885 Ahg472057 ATP binding microtubule motor family protein
20.9045 Ahg485999 ROP (rho of plants) guanine nucleotide exchange factor 6
21.2603 Ahg496418 structural maintenance of chromosomes 2
22.1811 Ahg474153 Protein kinase family protein with ARM repeat domain
23.2379 Ahg477613 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
24.8998 Ahg324343
25.6905 Ahg487987 myb domain protein 3r-4
32.0312 Ahg493473 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression