Detail



ID : Ahg930279

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930279|scaffold_302736.1
Sequence
AGTAGTAATC AGCTTTAGAA ATGGCAACAG CATCGTTCAA CATGCAATCA GTCTTCGCCG GTGGATTGAC CACTCGCAAG ATCAACACCA ACAAGCTTTT CTTCGCCGGA ACCTTCCCTA GTCTCAAGAG GAATTATCCG GTGGGAGTGA GATGCATGGC TGAGGGAGAG CCCAAAAACG AAGACTCTGC ACCTACCTCC GCGGCTCCTC CTCCTACTAA ACCTAAGGTG AGCACGAAGT TTAGCGATTT GCTAGCGTTC AGCGGTCCAG CACCAGAGAG GATTAACGGA CGCTTAGCTA TGGTTGGATT CGTTGCGGCG TTGGCTGTTG AGCTATCTAA GGGTGAAAAC GTATTCGCTC AGATCTCCGA CGGTGGCGTC TCATGGTTCC TCGGTACGAC GGCGATCTTG ACACTTGCGT CGCTTGTGCC ACTTTTCAAG GGCATAACCG CCGAGTCCAA GTCCGATGGT ATCATGACTT CAGACGCTGA GCTTTGGAAC GGACGTTTCG CCATGCTCGG TTTGGTCGCG TTGGCGTTCA CTGAGTTCGT CAAGGGTGGG ACACTCGTCT AAGGAAAAAA ATACATTATG GG 
Length592
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9635206.. 9636265
Download Sequence
A.thaliana
AGI-codeAT3G22840.1
DescriptionChlorophyll A-B binding family protein
TAIR curator summaryEncodes an early light-inducible protein.
Alias[ELIP][ELIP1][EARLY LIGHT-INDUCABLE PROTEIN]
Gene coexpression
MR
MR Locus Description
1 Ahg330043 Chlorophyll A-B binding family protein
2.82843 Ahg481185 Late embryogenesis abundant protein, group 6
2.82843 Ahg479675 UDP-Glycosyltransferase superfamily protein
3.4641 Ahg905775 AMP-dependent synthetase and ligase family protein
4.89898 Ahg485985 Regulator of chromosome condensation (RCC1) family protein
6.32456 Ahg919141 Major facilitator superfamily protein
7.34847 Ahg488447 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
7.74597 Ahg313816 nitrate transporter 1.5
8.24621 Ahg939527 Aldolase-type TIM barrel family protein
8.66025 Ahg902253 cold-regulated 15a
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression