Detail



ID : Ahg930576

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930576|scaffold_303033.1
Sequence
GAGAGAGAGC TTCAATATAT CCAACAATGG CGATCTTTAG CAGAAGCTTC TTAGCTCTCT CAGCAACTCT AATCATTCTA GCATTATGTA TAAATAATGC ATCAACAATG GCTCAAGAAA CGGAGCTAAA ATCTCATAGC TCGAGTAATT CATCAACGGC TAATACGTTA CCTAACGACG ACGGTGCATG GAATGAACAC GCCGTTAAAA ACCCAGAAGA AGTAGCTGCA ATGGTCGATA TGACGATTAA GAACAGTACG GAGCGGAGGA GGTTAGGATT CTTCTCATGC GCCACCGGAA ACCCAATCGA CGACTGTTGG AGATGTGATC GGAACTGGCA TCTCCGACGA AAGCGTCTCG CGAATTGCGC AATCGGATTC GGTCGTAACG CAGTCGGAGG ACGAGATGGT CGTTACTACG TCGTCACAGA TCCATCAGAC CACGACGCGG TTAATCCACG ACCGGGAACG CTCCGTCACG CCGTGATTCA AGACCGTCCG TTATGGATCG TCTTCAAACG CGACATGGTG ATTACTCTAA CTCAAGAGCT AATCATGAAT AGCTTCAAAA CGATCGATGG AAGAGGCGTG AACGTTGCAA TCGCAGGCGG TGCTTGTATC ACGATCCAGT TTGTGACGAA TATTATCATC CATGGGATTA ATATACATGA TTGTAGAAGG ACTGGTAATG CTATGGTTCG AAGCTCGCCG TCGCATTATG GGTGGAGGAC TATGGCGGAT GGTGATGCTA TATCGATTTT TGGATCGAGT CATATTTGGA TTGATCATAA TTCTTTGTCT AATTGTGCTG ATGGATTGAT TGATGCGATT ATGGGATCTA CTGCTATTAC TATCTCCAAT AACTATATGA CTCACCACAA CGAGGTTATG TTGATGGGGC ATAGTGATTC ATACACTAGA GACAAGTTGA TGCAAGTGAC AATAGCATAT AACCATTTTG GGGAAGGGCT TATACAGAGA ATGCCGAGGT GTAGACATGG TTATTTCCAT GTTGTAAACA ATGATTATAC TCATTGGGTA ATGTATGCAA TTGGTGGAAG TGCTAACCCT ACCATCAATA GCCAAGGCAA TCGGTTCCTT GCCCCGGGAA ACCCTTTTGC CAAAGAGGTG ACAAAGAGGG TAGGTTCATG GCAAGGAGAA TGGAAGCAAT GGAACTGGAG ATCACAGGGA GACCTAATGC TCAACGGTGC CTACTTCACT AAATCTGGAG CTGCTGCTCC TGCAAGCTAT GCCAGAGCCT CTAGTTTGGG AGCTAAACCA GCTTCCGTTG TAAGTATGCT TACCTACAGC TCTGGTGCCC TTAGATGCAG GATCGGTATG CGGTGTTAGT TAATTGTATA ATCCTCAAA 
Length1369
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11302714.. 11305366
Download Sequence
A.thaliana
AGI-codeAT3G24670.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg904690 F-box and associated interaction domains-containing protein
39.4208 Ahg470234 Drought-responsive family protein
49.96 Ahg914109 methyltransferases
53.7215 Ahg951560 carboxylesterases
58.0172 Ahg889612 peptidoglycan-binding LysM domain-containing protein
61.3351 Ahg944345 NADPH-dependent thioredoxin reductase B
63.2376 Ahg946674 Protein of unknown function (DUF789)
65.1153 Ahg485117 Pentatricopeptide repeat (PPR) superfamily protein
71.3863 Ahg497080 Protein of unknown function, DUF593
72.6292 Ahg334747
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression