Detail



ID : Ahg931117

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931117|scaffold_303574.1
Sequence
ATGGCTTTGC TTTTACTCTG ATGACTTGTT CAAAAATGGA ACAAAGATCA CTCCTTTGCT TCCTTCAGCT TCTCCTACTC TTCAATTTTA CTCTCAGAGT CGCCGCAAAC GTCGAAGGTG ATGCTTTAAC TCAGCTGAGA AACAGTTTAT CATCAGGTGA CCCAGCAAAC AATGTACTCC AAAGCTGGGA TGCTACTCTT GTTACTCCAT GTACATGGTT TCATGTTACT TGCAATCCTG AGAATAAAGT TACTCGTGTT GACCTTGGGA ATGCAAAACT ATCTGGAAAA CTGGTTCCAG AACTTGGTCA GCTTTCTAAC TTGCAGTACT TGGAGCTTTA TAGCAATAAC ATTACTGGGG AGATACCTGA GGAGCTTGGC AACTTGATGG AACTAGTAAG CTTGGATCTT TACGCGAACA GCATAAGTGG TCCCATCCCT TCGTCTCTTG GCAAACTAGG AAAACTCCGG TTCTTGCGTC TTAATAACAA TAGCTTATCA GGAGAAATTC CAATGACTTT GACTGCTGTG AAGCTGCAAG TTCTGGATAT CTCAAACAAT CGGCTTAGTG GAGATATTCC TGTTAATGGT TCCTTTTCGC TCTTCACTCC TATTAGTTTT AAGAATAATA ACTTAACGGC GCCTGCTGAA CCTCCGCCTA CTTCCACTTC TCCTACGCCA CCACCACCTT CAGGGAGTCA AATGACTGCA GCAATAGCAG GGGGAGTTGC TGCAGGTGCA GCACTTCTAT TTGCTGTCCC AGCCATTGCG TTTGCTTGGT GGCTCAGAAG AAAACCACAG GACCACTTTT TTGATGTACC TGCTGAAGAA GACCCAGAGG TTCATTTAGG ACAACTCAAA AGGTTTACCT TGCGTGAACT GTTAGTTGCT ACAGATAACT TTAGCAATAA AAATGTATTG GGTAGAGGTG GTTTTGGTAA AGTGTATAAA GGACGTTTAG CCGATGGCAA TCTAGTGGCT GTGAAAAGGC TAAAAGAAGA ACGTACCAAG GGTGGGGAAC TGCAGTTTCA AACCGAGGTT GAGATGATCA GTATGGCCGT TCATAGGAAC TTGCTTCGGC TTCGTGGCTT TTGCATGACT CCAACTGAAA GATTACTTGT TTATCCCTAC ATGGCCAATG GAAGTGTTGC TTCATGTTTA AGAGAGCGTC CTGAAGGCAA TCCACCACTT GATTGGCCAA AAAGAAAGCA TATTGCTCTG GGATCAGCAA GAGGGCTCGC GTATTTACAT GATCACTGTG ACCAGAAAAT CATTCACCGG GATGTGAAAG CTGCAAATAT ATTGTTAGAT GAAGAGTTTG AAGCTGTTGT TGGAGATTTT GGGCTCGCAA AATTAATGAA TTACAACGAA TCCCATGTGA CAACTGCTGT ACGTGGTACA ATTGGCCATA TAGCCCCTGA GTACCTTTCG ACAGGAACAT CTTCTGAGAA AACTGATGTT TTTGGGTACG GGGTCATGCT TCTCGAGCTC ATCACTGGAC AGAAAGCTTT TGATCTTGCT CGGCTTGCTA ATGATGATGA TATCATGTTA CTCGACTGGG TGAAAGAAGT GTTGAAAGAG AAGAAGTTGG AAAGCCTTGT TGACGCAGAG CTTGAAGGAA AGTACGTGGA AGCAGAAGTG GAGCAGCTGA TTCAAATGGC TCTGCTCTGC ACTCAAAGTT CTGCAATGGA ACGTCCAAAG ATGTCAGAAG TGGTGAGAAT GCTGGAAGGA GATGGTTTAG CTGAGAGATG GGAAGAGTGG CAAAAGGAGG AGATGCCAAT ACATGATTTT AATTATCAAG CCTATCCTCA TGCTGGCACT GAATGGCTCA TCCCCTATTC CAATTCCCTT ATCGAAAACG ATTACCCCTC AGGTCCAAGA TAACCTTTAA GAAAGGGTCA TTT 
Length1903
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17416352.. 17421162
Download Sequence
A.thaliana
AGI-codeAT2G13790.1
Descriptionsomatic embryogenesis receptor-like kinase 4
TAIR curator summary
Alias[ATSERK4][BAK7][BKK1][SERK4][SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4][BRI1- ASSOCIATED KINASE 7][BAK1-LIKE 1][somatic embryogenesis receptor-like kinase 4]
Gene coexpression
MR
MR Locus Description
6.245 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
10.7703 Ahg484186 protein kinase 2B
10.9087 Ahg942007 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
13.0767 Ahg484624 Oxoglutarate/iron-dependent oxygenase
13.4164 Ahg491768 autoinhibited Ca(2+)-ATPase 10
14.8324 Ahg494916 receptor-like protein kinase-related family protein
15.3948 Ahg943817 Arabidopsis phospholipase-like protein (PEARLI 4) family
17.2627 Ahg470264 glutathione S-transferase 6
18 Ahg327563 senescence-associated gene 21
18.5203 Ahg479576 Transmembrane proteins 14C
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression