| Annotation |
|---|
| Description | jgi|Araly1|931833|scaffold_304290.1 |
| Sequence |
GTTCGTTGAA GGAAGAAGAA GAAGATGCCT GCTCTAGCTT TTGTTGATAC TCCCATCGAT ACTTTTTCCG GTGATTACAG CGTCTTTACA CCGTCGTCTG CCACCGCCGC CATTGTTGAT TGGTCTCCGT CGCTCTCCTC CTCGTTGTAC CGTATCGACG GATGGGGAGC TCCGTATTTC GCCGCGAATA CCTCCGGGAA CATCTCTGTT CGTCCTCATG GCTCAAACAC TTTACCTCAC CAAGACATCG ATCTCATGAA GGTCGTGAAG AAAGTAACAG ATCCGAGTGG TTTAGGATTA CAGCTTCCGC TTATCGTTCG TTTTCCTGAT GTTCTGAAGA ATCGTCTTGA GTGTCTTCAA TCATCGTTTG ATTACGCGAT TCAGAGTCAA GGCTATGGTT CACATTACCA AGGTGTGTAC CCTGTGAAAT GTAATCAAGA TCGGTTTATT ATCGAAGATA TTGTCGAATT CGGATCGAGT TTTCGATTCG GATTAGAAGC TGGTTCGAAG CCTGAGATTC TTCTTGCTAT GAGTTGTTTG TGTAAAGGTA ATCCTGAAGC TTTTCTTGTG TGTAATGGTT TTAAAGACTC TGAGTATATC TCATTGGCTT TGTTTGGGAG GAAACTGGAA TTGAATACTG TGATTGTTCT TGAGCAAGAA GAAGAGCTTG ATTTGGTTAT TGATTTGAGT CAGAAGATGA ATGTTAGGCC TGTGATTGGG TTAAGAGCTA AGCTGAGAAC GAAACATTCT GGTCATTTTG GTTCTACTTC TGGTGAGAAA GGGAAGTTTG GTTTGACTAC GATTCAGATT GTTCGTGTGG TGAGGAAGCT GAGTCAAGTT GGTATGCTTG ATTGTCTTCA GCTTCTGCAT TTTCACATTG GTTCTCAGAT TCCGTCCACG GCTTTGTTGT CCGATGGTGT AGCTGAGGCT GCGCAGCTTT ACTGTGAGCT TGTCCGTCTT GGTGCTCATA TGAAGGTGAT TGATATTGGT GGTGGATTGG GGATTGATTA CGACGGGTCT AAATCGGGGG AGTCGGATCT CTCTGTTGCT TATAGTCTTG AGGAGTATGC TGCAGCTGTT GTGGCATCGG TTAGGTTTGT TTGTGATCAG AAATCTGTGA AGCATCCAGT GATATGCAGC GAGAGTGGTC GAGCCATTGT GTCTCATCAC TCGGTGTTGA TCTTTGAAGC TGTCTCAGCT GGTCAACAAC ATGAAACCCC AACTGATCTA AAGTTTATGC TTGAAGGGTA CTCGGAGGAA GTCAGAAATG ATTACGAGAA TCTTTATGGT GCTGCGATGC GTGGTGATCG TGAAAGCTGC TTGCTTTATG TTGATCAGCT GAAGCAGAGA TGTGTTGAAG GGTTCAAAGA AGGTTCCTTG AGCATTGAAC AGTTAGCTGG TGTTGATGGG TTATGCGAGT GGGTGATTAA GGCGATTGGC GCATCGGATC CGGTTCTTAC TTACCATGTC AATCTATCGG TTTTCACTTC GATTCCGGAT TTCTGGGGGA TTGATCAGCT GTTTCCTATA GTTCCAATCC ATAAACTTGA CCAAAGGCCT GTCGCGAGAG GGATCTTATC AGATTTGACT TGCGACAGCG ACGGAAAGAT CAACAAGTTC ATAGGCGGAG AATCGAGCTT GCCATTGCAC GAGCTGGACA ACAATGGCTG CAGCGGCGGG AGATACTATT TGGGAATGTT CCTAGGTGGA GCTTATGAAG AGGCTCTCGG TGGAGTCCAC AATCTGTTCG GAGGACCAAG CGTGGTCCGC GTCTTGCAGA GTGATGGACC TCACGGATTC GCAGTGACCC ATGCTGTGAT GGGTCAATCC TCTGCGGATG TCCTCAGAGC AATGCAGCAT GAGCCTGAGC TCATGTTTCA GACTCTTAAA CACCGAGCCG AGGAGCAGAG GAACAACAAC AACAAAGCTG GTGGTGATAA GGGAAATGAC AAACTAGTAG TCGCATCGTG TCTTGCTCGT TCATTCAACA ACATGCCTTA TCTTTCCATG GAAACGTCCA CAAACGCTCT CATCGCAGCG ATCAATAACC TCGGCGTTTA CTACCGCGAT GAAGCTGCAG CTGGTGGCGG CGGCGGCAGG GGCAAGGATG AGAAATGGTC TTATTTTGGT TGATCCTGTC TTTGATCTTC ACCG |
| Length | 2154 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 22025744.. 22027900 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G16500.1 |
| Description | arginine decarboxylase 1 |
| TAIR curator summary | encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements. |
| Alias | [ADC1][ARGDC][ARGDC1][SPE1][arginine decarboxylase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg470177 | Homeodomain-like superfamily protein |
| 4.24264 |
Ahg488445 | conserved peptide upstream open reading frame 10 |
| 5.47723 |
Ahg487463 | ABC-2 type transporter family protein |
| 5.65685 |
Ahg353351 | GLN phosphoribosyl pyrophosphate amidotransferase 2 |
| 7.74597 |
Ahg493346 | ERD (early-responsive to dehydration stress) family protein |
| 7.93725 |
Ahg482070 | salt tolerance homologue |
| 8 |
Ahg495528 | B-box type zinc finger family protein |
| 8.06226 |
Ahg341087 | |
| 8.12404 |
Ahg496632 | GTP cyclohydrolase II |
| 9.21954 |
Ahg335256 | ATP binding microtubule motor family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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