Detail


ID : Ahg931925

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931925|scaffold_304382.1
Sequence
GAGCTTTCAA AGCTAGCTTT AATGGCGTTT CATGGAATCA GAGAACTTGA AAACTATTTT ATACCTTTCC TTCAGCGAGT CAAAAGCCGA AATGAATGGA AGAAGATCCA TGCCTGCATC ATCGTACATG GATTATCACA AAGCAGCTTC ATGGTCACTA AAATGGTGGA TTTATGTGAT AAGCTTGGAG ATATGGATTA TGCAACTCGT CTTTTTAACC AAGTATCGAA TCCTAATGTC TTCTTATACA ATTCCATTAT TCGTGCTTAT ACACACAATT CCTTGTACTG CGATGTGATC AGAATCTACA AGCAACTGTT GAGGAAGACC ATTGAGTTTC CAGATCGGTT CACGTTTCCG TTTATGTTTA AATCTTGTGC AAGTCTTGGA TCATGTTATT TAGGGAAGCA AGTTCATGGT CATCTCTACA AATTCGGGCC TAGGTTCCAT GTTGTGACTG AGAATGCGCT GATTGATATG TATATGAAGT TTGATGACCT TGTTGATGCA CATAAAGTGT TTGATGAAAT GTCTGAGAGA GATGTTATAT CGTGGAATAG TTTGCTTTCT GGATATGCAA GGCTTGGGCA GATGAAGAAA GCAAAAGGGT TGTTTCATTT GATGATAGAT AAAACTATTG TATCTTGGAC TGCGATGATC TCTGGGTATA CTGGGATTGG TTGTTATGTA GAGGCTATGG ATTTCTTCCG TGAAATGCAG TTAGCTGGTA TTGAGCCTGA TGAGATCAGT CTCATTTCTG TTTTACCGTC GTGTGCGCAT CTTGGATCTT TAGAGCTTGG GAAATGGATC CATATGTATG CAGAGAGAAG AGGGCTTTTG AAACAAACTG GTGTTTGCAA TGCTCTTATT GAAATGTACT CGAAATGCGG TATGATTTGT CAAGCTATCC AATTGTTCGA GCAAATGAAA GGGAAAGATG TTATATCATG GAGTACGATG ATCTCAGGGT ATGCATATCA CGGGAACGCT CACCGAGCAT TTGAAACATT CATTGAAATG CAGAGAGCGA AGGTGAAGCC TAACGGGATC ACATTTCTTG GTCTTTTATC AGCTTGTTCA CATGTTGGTC TGTGGCAACA AGGGTTGAAG TATTTTGATA TGATGAGACA AGATTATCAG ATAGAACCCA AGATCGAACA CTATGGTTGT TTGATTGATG TTTTAGCAAG AGCGGGAAAA CTAGAACGAG CTGTTGAAAT AACAAAGACA ATGCCGGTGA AACCCGACTC AAAGATATGG GGTTCATTGT TGAGCTCTTG CAGAACAAAG GGCAATCTTG ATGTTGCACT GGTTGCAATG GATCATCTTG TGGAGGTAGA GCCGGATGAT ATGGGGAATT ATGTTTTGCT TGCCAATATC TACGCAGATT TGGGAAAATG GGAGGATGTT TCGAGATTGA GAAAGATGAT AAGGAACGAA AATATGAAGA AAACGCCAGG TTGTAGTTTG ATAGAAGTGA ACAACATTGT TCAGGAATTC GTTGCAGGAG ATAACAGTAA ACCTTTTTGG ACTGAGATCT CTCTAGTGTT GCAACTGTTT ACTTCACATC AGGATCAGGA TGTGATTAAA AACAACAATG CTCTTGCATT TATCGGTATG GTTTAAAAGC GTTTGAATTA TGGAAG
Length1646
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22526428.. 22528058
Download Sequence
A.thaliana
AGI-codeAT2G20540.1
Descriptionmitochondrial editing factor 21
TAIR curator summaryEncodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.
Alias[MEF21][mitochondrial editing factor 21]
Gene coexpression
MR
MR Locus Description
20.5913 Ahg346083 F-box family protein
23.4521 Ahg315628
38.6652 Ahg905716
40.9878 Ahg480527 Protein of unknown function (DUF3511)
41.4246 Ahg929417 Translation machinery associated TMA7
43.8178 Ahg911122 Endosomal targeting BRO1-like domain-containing protein
44.0454 Ahg905418
44.7437 Ahg321547 Uncharacterised protein family (UPF0497)
50.7346 Ahg898671 Transmembrane proteins 14C
52.7447 Ahg343054 AGAMOUS-like 44
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression