Detail



ID : Ahg932575

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932575|scaffold_400563.1
Sequence
AATCGCAACA ACCAGAAAAC ATGGCAAAAC CTGCAAAGGG CAAGAACAAA TCGCTACTGG ACTGCTCTCC TCTCCTCGAA GAGCTCCCGC AAAGTCCCGA TTGTAGGAAT CGGGGAAATC CTGAAGCAAA TCCGAGAAAA TGTAACATGG CAAAACCTGC AAAGGACAAG AACAAATCGC TACTGGACTG CTCTCCTCTC CTCGAAGAGC TCCCGCAAAG TCCTGATTGT AGGAATCGGG GAAATCCTGA AGCAAATCCG AGAAAATGTA ACATGGCAAA ACCTGCAAAG GACAAGAACA AATCGCTACT GGACTGCTCT CCTCTCCTCG AAGAGCTCCC GCAAAGTCCT GATTGTAAAC TGAAAGATTT AGGCATTTTG AGAATGGCAA AGCAACATTT CTTCAAGCCT CTTCTTCCCG GATTCCACAG TCACTTGACA ATTCCTGTGG CTTTCTTCTT GAAGAATATA GAAGGAAGAC ATGAGCAGAA GACGGCGGAG CTGAGATCAG ACGCGTCAAA GATAACTTGG GAAGTGAAGA TTGATGGACA GAGACTCACT GACGGTTGGA AAGAGTTTGC TCTCTCGCAT GATCTTCGAA TCGGTGACAT TGTGGTGTTT AGACAAGAGA GAGATATGTG TTTCCACGTT ACAATGTTGG GACCTAGTTG TTGTGAGATT CAATATGGTT CGTGTTTAGA CAACAAGAAC AACCTCGGGA AGATTCAAAG GAAGAAGAAT CCAAGAAGAG AAACAGAGTC TTCGTCACTA GATCCTTCTT GTTTTGTGGC TAATGTCACG GTTTCGAGTC TACGCGATGA CAGACTGAAT CTTCCAAGAA GTTTTGTGAG GGAAAATGGT CTAGACAAAA GATGTGTAGA GATTGTTCTG ATGAATGAAA AGGGCAGAAC ATGGACTTTA GATTTGAAAG GAAACAAATC ATACGGAACT ACTTACATCA AACGAGGATG GAGAAGTTTC TGCCATGCCA ATGGACTTAG AGCTGGAAGT ATCTTCACTT TCAAACTGAT CAAAAAAGGA AAAACTCCGG TTCTACGTTT GTTCTCCAAA GAGCCAGAAG AACAAGCTAA TGAAGCGTCT CTTTCTCCAG AACTGGAAAG CAATGAAGAT AGCAACCTTG GGAAGATTCA AAGGAGGAAG AATCCAAGTA GAGAAACAGA GTCTTCTTCA CTAGATCCCT CTTGTTTTGT GGCTAATATT ACGCGTTCGA GTCTACGTTA TGACATACTG TATCTTCCAA AGCGTTTTAT GAGGGCAAAT GGTCTAGACA CAAGATGTGG AGAGATGATT TTGATGAACG AAAAGGGCAG ATCATGGGCT TTAGATTTGA AACGAAAGAA CTCATGCGGA ACTACTTACA TCAAACGAGG ATGGAGAAGT TTCTGTCGTG TCAATGGACT TAGAGCTGGA AGTTTCTATA CTTTCAAACT GATCCAAAAT GAAAGAACTC TGGTTCTACG TTTGGTCCCC AAAGAGCCAG AAGAAGAAGA AGAAAAAGCC AATGTAGAGT CTCTTTCCAC AGAACCGAGT GATGAAGAGA GCAGCCAAGA TGAGAAGAGC TCACAAGAAT GTTCAAAAAC AATGGAAAAG AAGAGTATAT TGATACATCT CCGTTGTTTG AATCTTTCTC AGACTCTTCC CATACCTTTC ACAAAGGTGA ATGGCATACA AAATGCAAAG AAGATGAGTT TCTTGGATAA ACATGGCGTG AAATGGTCTA CGAGTCTGAG GTTTGAACAG GACCGTCAGA GAATGAGACT GGTAGGAGGC TGGAAAGAGT TTTGCGATGC GAACGATGTG AAGATAGGAG AATCGATCAT GTTAGAGCTA ATTTGGGAAT CAGACAAAAG CTCTGTTCTT AAGTTCTGCT CCAAGGTGAT GCAAGAGATC AAATGAAACT GTTTCTGAGG TTATGG 
Length1936
Protein Sequence
Protein Residue
Map Locationscaffold_4: 3122210.. 3127813
Download Sequence
A.thaliana
AGI-codeAT4G00260.1
DescriptionTranscriptional factor B3 family protein
TAIR curator summary
Alias[MEE45][maternal effect embryo arrest 45]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg887750 F-box/RNI-like superfamily protein
20.4695 Ahg926326
25.923 Ahg931246 lipase 1
28.3549 Ahg952309 Tetratricopeptide repeat (TPR)-like superfamily protein
73.7089 Ahg895742
85.7904 Ahg352381 Homeodomain-like superfamily protein
86.7871 Ahg931944
92.3905 Ahg924509
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression