Detail



ID : Ahg933387

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933387|scaffold_401375.1
Sequence
TATTCAAACA AATATTGAAC ATGGTTACGT GGGTTTTGCA TTATCTTCTC GTGGCATTTC TGATTGCCAT TAGTTACAAC ATCGATGCAG CATCTGCAGG AATCACGCGG CACTACCAGT TCGATATTCA ACTGAAAAAC ATCACAAGAT TGTGCAAGAC GAAAACAATC GTGACGGTCA ATGGAAAATT CCCAGGACCT AAGGTTACCG CAAGAGAAGG AGATAATCTA CAGATCAAAG TTGTTAATCA TGTCTCTAAT AACATTTCTA TCCACTGGCA CGGTATCCGG CAGCTAAGGA GCGGATGGGC GGATGGACCA TCGTATGTGA CACAATGTCC AATTCGGACC GGACAAAGTT ATGTTTACAA CTTCACGGTG ACTGGACAAA GAGGAACCTT GTGGTGGCAT GCTCATATTC AATGGATGAG AGCTACCGTG TACGGACCTT TGATCATTCT CCCTAAACTC CATCAGCCTT ACCCTTTTCC CAAACCCTAC AAACAAGTCC CTATAATCTT TGGTGAATGG TTTAATGCTG ATCCTCAAGC AGTGCTACAA CAAGCTCTTC AGACGGGTGC AGGCCCAAAT GCTTCTGATG CTCATACTTT TAATGGGCTT CCAGGTCCAT TATACAATTG CTCTACAAAA GATACGTACA AACTGATGGT AAAACCTGGA AAGACGTATC TACTACGATT AATCAATGCT GCACTCAATG ACGAACTCTT CTTCACCATA GCCAATCATA CATTGACGGT CGTAGAAGCG GATGCTTGCT ACGTTAAACC ATTCCAAACC AACACCGTGC TTCTCGGTCC AGGCCAAACC ACCAACGTAC TACTCAAAAC CAAACCTATT TATCCAAATG CAACCTTTTA CATGTTGGCA AGACCGTACT TTACGGGCCA AGGAACAATT GATAATACAA CCGTTGCGGG AATTCTCCAA TACCATCATC ATTCCAAATC TTCTAAGAAT CTTTCTATTA TTAAACCATC TCTCCCTCCC ATCAATAGTA CGAGCTACGC CGCAAATTTC ACAAAAATGT TTAGAAGTTT GGCAAGTTCT ACATTTCCGG TAAACGTGCC AAAAACCGTG GACAAAAAAT ATTTCTTTAC CGTCGGTCTA GGAACCAACC CTTGTCCTAA AAACCAAACA TGCCAAGGAC CAACTAATGC AACGAAATTT GCAGCATCTA TCAACAATGT CTCTTTCATC TTACCAGACA AGACTTCTCT ATTACAATCA TACTTCGTTG GCAAGTCCAA CAATGTTTTC ATGACCGATT TCCCAACTGC CCCTTTTTTT CCATTTAATT ACACGGGGAC GCCACCAAAC AACACAATGG TCTCAAGAGG GACCAAAGTT GTGGTCTTGA AGTACAACAC AACTGTTGAA TTGGTGTTAC AGGGCACTAG CATCTTGGGT ATTGAGGCCC ACCCTGTACA TCTTCATGGC TTCAACTTTT ATGTGGTGGG TCAAGGCTTC GGCAATTTTA ACCCGGCCCG TGACCCAAAG CAATATAATC TAGTCGATCC GGTCGAACGA AACACCATCA ATGTCCCTTC CGGTGGTTGG GTCGCCATCC GCTTCCTCGC CGATAATCCC GGTGTGTGGC TGATGCATTG CCACATTGAG ATTCATTTGA GTTGGGGTCT GACCATGGCT TGGGTGGTTT TGGACGGTGA CCTTCCAAAT CAGAAACTCC TTCCTCCACC CTCAGATTTC CCTAAATGTT GACTCTGACC GATCCAACGC CT 
Length1762
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12737362.. 12739822
Download Sequence
A.thaliana
AGI-codeAT2G29130.1
Descriptionlaccase 2
TAIR curator summaryputative laccase, knockout mutant had reduced root elongation under PEG-induced dehydration
Alias[ATLAC2][LAC2][laccase 2]
Gene coexpression
MR
MR Locus Description
18.7083 Ahg913197 Protein of unknown function (DUF579)
27.3679 Ahg324948 HXXXD-type acyl-transferase family protein
27.6586 Ahg938546 Plant protein of unknown function (DUF828)
38.4708 Ahg482815 Laccase/Diphenol oxidase family protein
58.515 Ahg494336 Ca2+ activated outward rectifying K+ channel 2
92.8386 Ahg493397 amine oxidase 1
96.6437 Ahg938139
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression