Detail



ID : Ahg934582

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934582|scaffold_402570.1
Sequence
CATTGTTGCA AATTGAAACA ATGACGACGA TGATCTCTAA TCTTCCAACG GTTTTGATAG AGGAGATTTT AATTAGGGTT CCTTTGAAAT CTTTGAGAGC AGTGAGATTA ACTTGCAAAA TTTGGAACAC TCTATCCAAT AGTAGGAGCT TTCTGAAGTT GTACATTGGT AAACCAGCAA CAGCAACAAG AGAAGAGGAT TCTATGATGG TCGCGATGAT GAATTTTGAT CTTTATTCAA TGAGGGTCGT AGTTGACGAC GTTGATCCAT CTATAGCGTT TAAACGTAAA CCTAGTTTCC TTGAAGAACA AGTCAAGGTA TCTCAAGTCT TTCACTGTGA GGGTTTATTG CTATGCATCT TCAAAGACAA TACTAAGGTT GTGGTTTGGA ATCCGTATTG CGGGGAAACA AGGTGGATCG AACCAAGATT TTCTCATCGT CCAAGGGGGT GGGACAGGTT CAGTTATGCT CTAGGATACA AGGATAAGGA ATCTTGTGAT AGCTTTAAAT TCTTGAGGTT CATAGATTAT TTCTGCTTTG CACCCGAAAA TCAATTTTTT TGGTATGAAA TCTATGATTT TGACTCTGAT TCATGGACAA CTCTTGATGT CACTCCAAAC TGGTGTATAA TGTTTGCTAA CCTTGGTATT ACTCTCAAAG GAAACACTTA CTGGTGTGCT GGGGAAAGGA ACTCAGAAGA TGATATTGCC GATCACATAA TCTGTTTTGA TTTTACAAGC GAGAGATTTG GACCGCTTTT ACCTCTGCCG ACTAGCGTCA GGGATCATGA GTATGAATAT GTGACTTTAT CTTGTGTTAG GGAAGAGAAG CTTGCAGCTT TATTTCAGCA CAACGAATCA AATCCGTATG AGCTTGAGAT ATGGATTACA ACTGAGATTA ATGCCGAAAT GGTGTCGTGG AGCAAGTTCT TGATGATGGA TACCGGACCT AGGATAGAGG TTCCACTTAT ATGGGAAGGT TTCTTCATTG ACGAGGAGAA GAGAAACGCC ATGGGTTTTG ACGAAGAGTT CAGTCGTAAA ACATTTATCA TCATTGGAGA GGCTGGATAC GTAAGAAAAT TGGATATTGG AGTAGACATA GATTGTCGAC CAAAAGTGTG CTCTTATGTT CCAAGTTTGG TCCAAATCAA GAAACCTGCA GGAGGAAAAA GGAAAAGACA AAGCAGCTTA GAAACGGGTC TATTTGAGCA AAACATGTTG AGACTTGAAG CATTTGAAAA GCTAAAATTA GTCTAGAAAC AATATGCAGG AGGAGT 
Length1276
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17765956.. 17767220
Download Sequence
A.thaliana
AGI-codeAT2G38590.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg939687 F-box/RNI-like superfamily protein
10.583 Ahg952288 Peroxidase superfamily protein
18.1659 Ahg918984
21.9089 Ahg357625 DNA repair and meiosis protein (Mre11)
25.807 Ahg947256
27.8927 Ahg916733 Protein of unknown function (DUF1278)
38.6135 Ahg929871 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
44.2719 Ahg477889 Heavy metal transport/detoxification superfamily protein
46.9574 Virus0753
58.1722 Virus0883
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression