Detail



ID : Ahg935133

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935133|scaffold_403121.1
Sequence
GAAGAATACG CAGATTCCAT CCAATTTAGG GTTAGGGCTT CCCCTAATTT GGAAACCTAG TCCTGTTTCC TGATCTGTTT TCCGGATCGG ACGAGAGGAG AGACGAAGTA ACGAAAATGG GCGCGAATTC TATTCCGACG GACGCAACCA TTGATCTTGA TGAGCAGATC TCGCAGCTTA TGCAGTGCAA GCCTCTCTCG GAGCAACAGG TTAGAGCATT ATGCGAGAAA GCCAAGGAGA TCTTAATGGA TGAAAGCAAC GTTCAGCCTG TGAAAAGCCC TGTGACAATC TGCGGTGATA TTCATGGACA GTTCCATGAT CTTGCTGAGC TTTTCCGTAT AGGGGGAATG TGCCCTGATA CCAATTATCT GTTTATGGGA GACTATGTGG ACCGCGGTTA TTATTCTGTT GAAACTGTTA CGCTGTTAGT CGCCTTAAAG ATGCGATATC CTCAGCGAAT CACTATTCTT AGAGGAAACC ATGAAAGTCG TCAGATTACT CAGGTTTATG GATTTTATGA TGAATGTCTG CGAAAGTACG GCAACGCAAA TGTTTGGAAA ATCTTTACAG ACCTCTTCGA CTATTTTCCT CTGACAGCCT TGGTTGAGTC AGAAATATTT TGCCTTCATG GTGGATTATC TCCATCTATC GAGACCCTTG ACAACATAAG GAATTTTGAT CGAGTTCAAG AAGTTCCCCA TGAAGGGCCA ATGTGTGACT TATTATGGTC TGACCCCGAT GACCGATGTG GTTGGGGCAT CTCTCCTCGA GGTGCCGGAT ATACGTTTGG TCAGGATATA TCCGAACAAT TCAATCACAC AAACAACTTA AAGCTGATCG CCCGAGCTCA CCAGTTGGTT ATGGATGGAT ACAACTGGGC TCACGAGCAA AAAGTGGTTA CTATTTTCAG TGCACCAAAC TATTGTTATC GTTGTGGGAA CATGGCCTCG ATTCTTGAGG TCGACGACTG CAGGAACCAC ACCTTCATTC AGTTTGAACC AGCACCGAGG AGAGGAGAAC CAGATGTCAC CCGAAGGACT CCAGACTATT TTCTGTGATC ACTGGACACA GACTCATCTC AATCAGCAGC TGCAGGCACC 
Length1100
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19749967.. 19753260
Download Sequence
A.thaliana
AGI-codeAT2G42500.1
Descriptionprotein phosphatase 2A-3
TAIR curator summaryEncodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].
Alias[PP2A-3][protein phosphatase 2A-3]
Gene coexpression
MR
MR Locus Description
7.87401 Ahg913611
17.9444 Ahg488785 mitogen-activated protein kinase 16
21.7025 Ahg473063 HAESA-like 1
29.9165 Ahg472320 tonoplast monosaccharide transporter1
30.0666 Ahg327775 histone deacetylase 1
31.1769 Ahg903463 Homeotic gene regulator
35.2136 Ahg483117 appr-1-p processing enzyme family protein
39.5221 Ahg484645 ATPase, V0/A0 complex, subunit C/D
42.4264 Ahg491637 Protein of unknown function (DUF2296)
51.3809 Ahg930446 RNA recognition motif (RRM)-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression