Detail



ID : Ahg935306

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935306|scaffold_403294.1
Sequence
TGTAATTAAG AAACATTAAA TATGGATAAT AATAAGCTTG TAGCTGTTTT GGTGATCTTG CTGATGAAAT CATCAACGGC TGCGAACAAC TACAATGTCG TCAGCTTCGG TGCTAAACCG GACGGAAGAA CCGACTCCAC AGAAGCTTTC CTGGGAGCGT GGCAAGCAGC TTGCCGTTCA GCTGCAGCAG TCACTGTAAC GGTCCCGAGA GGAAGCTTCT TGCTAAAACC GGTGGAGTTT CGTGGTCCAT GTCGCAGTAG AATCACGTTT CAGATCTATG GAACGATTGT TGCTCCTTCG GATTACCGTG GTTTGGGGAA TTCCGGTTAT TGGATCTTGT TCGTGAAAGT TAACCGGATC TCAATCAATG GAGGAACGTT AGATGCTAGA GGCGCTTCTT TTTGGGCGTG TCGAAAATCC GGAAAGAGTT GCCCTGTTGG CGCCAGATCA ATGACGTTTA ACTGGGCAAA CGACGTAGTA GTGACCGGCT TAACGTCAAT AAACAGTCAA GCAACACATT TAGTGATAAA TAGCTGCAAC AATGTAATTG TCCGGAAAGT AAAGCTAGTG GCTCCAGACC AAAGTCCCAA CACAGATGGC CTTCACGTCC AAGGTTCTGC TGGTGTTACC GTAACCGATA GCACATTCCA AACCGGAGAT GATTGTATCT CAATCGGTCC TGGAACTCGT AACCTCTACA TGTCTAAACT CAATTGCGGT CCAGGCCATG GAATCAGTAT TGGGAGTTTG GGAAGAGATG CAAATGAAGC TGGAGTAGAG AACATAACGT TGATAAACTC TGTTTTTTCA GGTTCCGATA ATGGTGTTCG GATCAAGACA TGGGCTAGAC AAAGTACAGG TTTTGTAAGA AACGTTTTGT TTCAGAATCT GATCATGAAA AATGTTCAGA ATCCGATCAT TGTCGATCAG AATTACTGTC CGGCTAATCA AGGTTGTCCC AAACAGGGTT CTGGAGTGAA GATTAGTCAA GTTGTGTATA GAAACATTCA AGGGACGTCG CGGAGGCAAC AGGCTTTAAC GTTTGATTGC AGTCGCAGTA ATCCGTGCCA AGCGATTAGA TTACATGATA TTAAGCTAAC GTTTAACGGT CGGTCCGCTA CTGCGACATG TAAGAATATT AAAGGAGTTA AGGCTGGTGT AGTGATGCCT CAAGGTTGTC TTTGATATAA TTCATGAATT TGAAGGTGT 
Length1209
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20353287.. 20354528
Download Sequence
A.thaliana
AGI-codeAT2G43890.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.85565 Ahg911245
16.9706 Ahg906918 transposable element gene
18.303 Ahg338633
19.1311 Ahg486339 metal tolerance protein A2
27.0555 Ahg913507
37.9473 Ahg924433 Protein of unknown function (DUF784)
37.9473 Ahg924439 Protein of unknown function (DUF784)
39.3827 Virus1173
40.0999 Ahg912904
47.6655 Ahg891601 FBD / Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression