Detail



ID : Ahg936279

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936279|scaffold_500470.1
Sequence
CACACCAAGT GTTCGATAAA ATGGCTGAAC GAAAGAAACG CTCTTCTGTT CAAACCAATA AACCCCACAA AAAACCCATG AAGAAGAAAA CTTTTCAGCT AAATCACCTC CCAGGTTTAT CTGAAGATTT GAAGACTATG AGAAAACTCC GTTTCGTTGT GAATGATCCT TACGCTACTG ACTATTCATC AAGCGAAGAA GATGAAAGGG TTCAGAGAAG GAAACGTTAT GTCTGTGAGA TTGATCTTCC TTTCGCTCAA GCCGCTACTC AAGCAGAATC TGAAACCTCA GTTTGTCAGG AGAGTAGTAA TAATGGTGGA AGCAAATCCA AAATCTCAGC TTGTAGCAAA AAGATTTTGA GCAGCAAAGT GTCGCCGGTC GTTGGACGTT CTTCTAGTGT CTCGAAGCCT GTTGGTGTTA GGCAGAGGAA ATGGGGTAAA TGGGCTGCTG AGATTAGACA TCCAATCACT AAAACTAGAA CTTGGTTGGG TACTTACGAG ACGCTTGAAC AAGCAGCTAA TGCTTATGCT GCTAAGAAGC TTGAGTTTGA TGCTTTGGCT GCAGCCACTT CTGCCGCTTC CTCTGTTTTG TCAGATTCAA ATGAGTCTGG TTCTATGATC TCAGCTTCAG GGTCTAATGT TGAAGCTGTG TCAAGCATTG ATCTTGACAA GAAGCTAGTT GATTCGACCC TTGATCCGCA AGCTGGTGAA TCGAAGAAAG CGAGTTTTGA TTTCGACTTT GCAGATCTAC AGATTCCTGA ATTGGGTTGC TTCATTGATG AGTCTTTAAT CCCAAATGCT TGTGAGCTTG ATTTTCTCTT AACAGAAGAG AACAACAACC AAATGTTGGA TGATTACTGC GGCATAGATG ATCTGGACAT CATTGGTCTT GAATGTGACG GTCCAAGCGA ACTTCCAGAC TATGATTTCT CAGACGTGGA GATCAATCTT GGTCTCATTG GAACCACCAT TGACAAGTAT GCATTCGTTG ATCATATCGC AACAACTTCT ACCACTCCTC TTAATATCGC GTGCCCATAA GTTTTGCAGC TAGGTGTTAT 
Length1060
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2408675.. 2409734
Download Sequence
A.thaliana
AGI-codeAT3G25890.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.
Alias[CRF11][cytokinin response factor 11]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg902342 Radical SAM superfamily protein
11.7047 Ahg483334 vascular plant one zinc finger protein 2
15.8745 Ahg933722 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
18.7617 Ahg911413
21.0713 Ahg336756
21.4942 Ahg470389 Tetratricopeptide repeat (TPR)-like superfamily protein
24.0832 Ahg495363
25.0998 Ahg488121 5-formyltetrahydrofolate cycloligase
27.9106 Ahg933117 topoisomerase II
27.9821 Ahg318914 Arabidopsis thaliana protein of unknown function (DUF794)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression