Detail



ID : Ahg936523

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936523|scaffold_500714.1
Sequence
GAATTGTGTC GAACACCTTC AATGGATTCT TCTTCATCAG TCGTTTACGT TGGTTCATCA TCCAAACCCA GAAACCTTCC AGCCAAATCC AAAGGTTCGA TTACATCTTT TTCAATCGAT TCAAGAAGCA CCAAGAAATC AGAACGGCCA TTGAAGAAGG CGTTAATACC AGAACCAGAA ACAACTTCCC CTGAAGTTAT AGAAAGTTCT GAATCCTCTG TTTCAGCTGA ATCCGAAACA CCAATTTCGA TTATACGTAA GAAGAAACAA TCAGAGCCAA GATATTACCC TAGCCCAACG AACACGTTTT ACACAGCGCC ACTCTACACG GAAGCAAAAC AGAGCTTTAC CAACACAGAA GTCAGTGAAT GTGCAAGCAT ATGCACTATC GGTATAGGCG GTATCGATTT GGAGAAGAAT GGTGTAATGA TATACAGAGG AAGTACAGGG AGTGATGTTA GTGACGAGAG TAGCTTGAGT AGTATGAGTA ATGCAGCTTA TAAGCCACAT AGAGCTAATA ACGATAAGCG TTGGGTTGCG ATACAGGAGG TTCGGTCTCG GGTTGGTTCG TCGCTTGAGG CTAAAGATTT CAAGCTGATG AAACGGCTTG GAGGAGGTGA CATTGGGAAT GTTTACTTAG CTGAGTTGAT TGGAACTGGA GTGAGTTTTG CTGTGAAAGT TATGGAGAAA GCAGCTATTG CAGCGAGGAA GAAGCTTGTT AGAGCTCAGA CTGAGAAAGA GATACTTCAA TCGTTAGATC ATCCGTTCTT GCCTACGCTT TATTCACATT TCGAAACAGA GAATCATTCT TGTTTGGTTA TGGAGTTTTG TCCTGGTGGT GATTTACATT CTCTCCGGCA AAAACAGCGT GGAAAGTACT TCCCTGAGCA GGCTGCTAGG TTTTATGTTG CTGAAGTGCT TCTTGCGATG GAATATCTAC ACATGCTTGG GATCATTTAC AGAGACCTTA AGCCTGAGAA TGTTTTAGTT CGTGAAGATG GACATATAAT GCTATCCGAT TTCGATCTCT CCCTGAGATG TGCAGTCTCT CCAACGTTGG TTCGTTTCGC AGCAATCACG CTCGAGTCCA AAAGCTCAAG CTACTGTATC CAGCCAACAT GTGTAGACCA ATCGAGCTGC ATTGTTCAAC CTGACTGCAT CCAGCCAGTG TGTTTCACTC CTCGGTTCTT GTCTAAAGGA AAGCACAAGA AGAAGTCGAA CGATATGAGC CGCCAAATCA GACCGCTCCC CGAGCTTATC GCTGAACCGA CTAGCGCAAG GTCAATGTCG TTTGTCGGCA CACACGAGTA CTTAGCACCA GAGATTATCA AAGGAGAAGG CCACGGCAGC GCGGTTGACT GGTGGACATT CGGGATTTTC CTCTATGAGC TTCTATTCGG GATAACACCG TTTAGAGGAG GCGATAACAG AGCGACACTC TTTAACGTAG TTGGACAGCC ATTGCGGTTT CCCGAGCACC CAAATGTGAG CTTTGCAGCT AGAGACTTGA TCAGAGGATT GCTAGTGAAA GAGCCTCAGC ACCGGTTGGC TTATAGAAGA GGAGCTACTG AGATTAAGCA ACATCCGTTT TTCCAAAGTG TGAATTGGGC TTTGATCAGA TGCACCAGTC CACCACAGAT CCCTCAACCG GTTAAACCAA TGGATCAAGC TCCTAGTCTT CGTCATGGTC TTAGTCAAGG ACATGGACAT GGTGTTCATG ATAATAAGCC TCCTACTGTG GATGTGAAGC CTTCTGGTAA TTATTTGGAA ATTGATTTCT TCTGATTTGT GGTTGGTTCA ATCTT 
Length1805
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3677516.. 3679402
Download Sequence
A.thaliana
AGI-codeAT3G27580.1
DescriptionProtein kinase superfamily protein
TAIR curator summarya member of a subfamily of Ser/Thr PKs in plants.
Alias[ATPK7][D6PKL3][D6 PROTEIN KINASE LIKE 3]
Gene coexpression
MR
MR Locus Description
32.5423 Ahg927569 Plant protein of unknown function (DUF946)
37.55 Ahg494175 MATE efflux family protein
64.8614 Ahg484862 Basic-leucine zipper (bZIP) transcription factor family protein
67.7938 Ahg483935 Pollen Ole e 1 allergen and extensin family protein
69.9285 Ahg480825 spermidine hydroxycinnamoyl transferase
77.3628 Ahg921700 ENTH/VHS/GAT family protein
78.3071 Ahg334832 HCO3- transporter family
97.8621 Ahg889689 Calcineurin-like metallo-phosphoesterase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression