Detail



ID : Ahg937551

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937551|scaffold_501742.1
Sequence
TAAAGCTGCT TCTGGAGAAG ATGAGTGCGG TAGAACCAGA CATGGAAGAT CTGTTCCAGG AGAAGAAGCG TGTCAGGAAT CCTCTCGTTC CTCTCGGTGC ACTTATGACT GCGGGAGTGC TTACGGCTGG GCTGATTAGT TTCAGAAGAG GCAATTCTCA GTTGGGTCAG GTTTTGATGA GAGCTAGAGT GGTCGTCCAG GGTGCTACTG TCGCTTTAAT GGTTGGAACC GCTTATTACT ACGGTGATAA TCCGTTACTT TTGTCTGAAA TCCATGAAAC AGAAGCTCTT TCACCTAAAT CTTCATCTGC AGCAACTATT ACTCTTATGA ACCAGAAAGA TCCATCTTCA AGCTCTATAG TCTCTGTTTT ATGTTTAGTT ATCTCTGTTC TTGCTCTTAT CATCGTCTTC CTAGGTGTCC TCTACTTAAT CTTCAAATTT CTCCGCAAGT CCTCGACTTT ATTTCCCATT CCTCATTTCA ATCCCAACCC AGATCTCTCT TCTTCCTCCT CTCCTCAGCT CCAGCACCTC TTCTTCCTCC ATGACTCTGG TCTAGACCAG ACCTCCATTG ATGCACTTCC CGTGTTCCTC TATGGTAACG TAACCATGAG TCTGAAAGAG TCTTTCGATT GCGCTGTATG TCTCAATGAG TTCTCTGACA CAGACAAGCT CAGGCTACTC CCAGTCTGTA GCCACGCATT CCATCTTCAC TGTATCGACA CATGGCTTCT CTCCAACTCT ACTTGCCCTC TCTGCAGACG ATCACTCTCA ACCTCAAACG TCTGCTATAA CCATGCTGAG GCTCTTGTCG TCCCCTTGTC CGGGCATCAG CAGGTCGACG AAGGCAAAGC CTCCCTTGCT AAAAGAGTCT TCTCTGTTCG TCTTGGGAGA TTCAAAAGCA CGAACGAAAG TCAAAGTCAA CGACATGATG TCAAAGATGA AATTGGTGTA GGAATGCCAA GAAGGTGTTA CTCGATGGGC ACACAACAGT ATCTCGAATG CGATCAAGAT TTTGTGGTGG CTCTGTCTTC GTCTCTTCGT GAGGGAAATA CCGGTAATAA CTGCTCCATT CACGAGGGTG ATTTGGTAAA ACAAGACTCT GGTGGTTTGG GTAGGCACTA ATGTATTGTA GTAGGAAAGA G 
Length1141
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12918712.. 12921408
Download Sequence
A.thaliana
AGI-codeAT3G48030.1
Descriptionhypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg919120 cobalt ion binding
14.6969 Ahg950803 conserved peptide upstream open reading frame 62
23.6432 Ahg891563 DNA directed RNA polymerase, 7 kDa subunit
25 Ahg949730 pfkB-like carbohydrate kinase family protein
32.078 Ahg487332 Cytochrome b-c1 complex, subunit 8 protein
33.2566 Ahg919082 translocase of outer membrane 22-I
35.327 Ahg924628 Aldolase-type TIM barrel family protein
42.7317 Ahg494862 EDM2-like protein1
45.2769 Ahg473502 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
49.8498 Ahg931728 homeobox protein 24
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression