Detail



ID : Ahg937996

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937996|scaffold_502187.1
Sequence
AAACCCTTGA GAGTAAAGTC ATGGCCTTTG CACGCCAAGT GTTTGTGTTA TTGTCTGTGT TAGTGGCGTG TTGGGGACTG CAGAGATGTG AGAGTGCTGG GAAGTTCAGC TTCGAAGTTC ACCACATGTT CTCTGATACG GTCAAGCAGA ATCTTGGGTT TGGCGATCTA GTGCCCGAAA AGGGAAGTTT GGAGTACTTC AAGCTTTTGG CCCAGCGCGA TCGGTTGATC AGAGGTCGAG GTCTTGCCTC CAACAACGAA GAAGCCCCTG TTACTTTCAT CCTGGGAAAT CGCACGGTTT CAATCGACTT TTTGGGATCC GATTTGTTTT GGTTGCCTTG CAATTGTGGG ACTACTTGTA TCCGTGACTT GGAGGACATT GGACTTTCAC AGGGAGGGTG TTCTTCTCCT GCAAGTGTTT GCCCTTATCA GATCCCGTAC CTTTTTAACA CCACATCCAC CAGAGGGACA TTGTTTGAGG ATGTATTGCA TTTGGTCACA GAGGACGAGG GTTTAGAGCC TGTCAAAGCT AATATCACGC TTGGTTGTGG TCAGAATCAG ACAGGTTTGT ATCGGAGAAG TTTGGCTGTG AACGGTCTTC TTGGGCTTGG TATGAAAGAT TACTCAGTTC CGAGTGTACT GGCAAAAGCA AATATCACTG CAAACTCTTT CTCAATGTGT TTCGGGAATA TTATTGACTT TATCGGAAGA ATCAGCTTCG GTGACAGAGG CTACACAGAC CAGCTAGAGA CACCACTAGT TCCTATTGAA CCAAATCCGA CATATGCTGT GAATGTGACC GAAGTAACAG TGGGGGGAGA TATTCTCAAG ATTCAGATGC TAGCTCTCTT CGACACTGGC ACATCATTTA CACACTTACT GGAGCCAGCA TATGGTCTTC TTACCAAAGC TTTTGACGAT CATGTAACTG ATAAGCGACG CCCGATCGAT CCTGAGATTC CATTTGAGTT CTGTTACGAC ACAAGTCCAA ATATTACAAG CTTTAAATTC CCCAGAGTAA ATATGACTTT TGTAGGAGGA TCCAAACTGA CTCTGAGAGA TCCGCTTTTC ACAGTGTGGA ATGAGGCAAG ACATGGAGCG TGGATTTCAA GCTTAACATT TTCGGACAGA GAAAAAAAAA AAAAAGAGTA TGTATTGAAT GCATTTCACA TTTGGGTGGT TGCAGAGAAC TTGATGTCAG GCTACCGCAT TGTATTTGAC CGGGAGAGAA TGATTTTGGG TTGGAAGCGG TCTGATTGTA AGTGATGAAA TCAGGAAGTG ATTGTA 
Length1286
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14729085.. 14735500
Download Sequence
A.thaliana
AGI-codeAT3G51330.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.4641 Ahg898845 thylakoid lumenal 17.9 kDa protein, chloroplast
3.87298 Ahg488814 Homeotic gene regulator
7.93725 Ahg472990 DEAD/DEAH box RNA helicase family protein
22.2261 Ahg946991 phragmoplast-associated kinesin-related protein 1
29.1376 Ahg349486 Duplicated homeodomain-like superfamily protein
34.9857 Ahg896306 Pentatricopeptide repeat (PPR) superfamily protein
34.9857 Ahg896310 Pentatricopeptide repeat (PPR) superfamily protein
35.4965 Ahg486968 Tetratricopeptide repeat (TPR)-like superfamily protein
37.9868 Ahg496141
38.5746 Ahg488353 Protein of unknown function (DUF1637)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression