Detail



ID : Ahg938369

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938369|scaffold_502560.1
Sequence
TCTGAAATTG ACATCGGAGG TGAAAATGGC CGAAGAAGGG TGCTGTGAAA ATGGTGAGTC GACGTTTAAA AATGGTAGCC ACTGTATTTC GAAGACTGAG GACACCGGAG GAATCGACAG CAAGAGGTTT TACTTGGCTC GCACGACAGC TTTTGAGATG CTTCGCGACA GAGGCTACGA AGTTAATGAA GCTGAGCTCT CTCTCACTCT TTCTGATTTT CGTTCTGTTT TTGGTGAGAA GCCTGACCTT GAACGCCTCC GTATCTGCGT TCCTCTCCGC TCAGATCCCA AGAAAAAGAT CCTTGTTGTG TTCATGGGAA CTGAACCAAT CACCGTGAAA TCAGTTCGTG CTATTCATAG TCAGATTTCC AACAATGTAG GCGTGAATGC TATGATTCTG ATATTACAGA GCAAAATGAA CCACTTTGCC CACAAGGAAT TGACAACCTT CCCTTTTACA GTTGAAACTA TCCCGATTGG AGATTTGTTG GTCAACATCA CAAAGCATAT TCAGCAGCCA AAGATTGAGA TTTTAAACAA AGAGGAGAAA GAACAATTGC TGAGGAAGCA TGCCCTTGAG GACAAACAGG AGGACAGCTT CGTCAGATAC TATGGGTTAA AGAAAAAACA GGTGGTGAAG ATTACATACA GTAAAGAGCC TATTGGGGAT TTTGTGACAT ACCGATGCAT CATCTGAACT CTGAAGAAAG GCAAATT 
Length717
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16099261.. 16100892
Download Sequence
A.thaliana
AGI-codeAT3G54490.1
DescriptionRNA polymerase II fifth largest subunit, E
TAIR curator summaryNRPE5-like protein of unknown function; homologous to budding yeast RPB5
Alias[RPB5E]["RNA polymerase II fifth largest subunit, E"]
Gene coexpression
MR
MR Locus Description
21.095 Ahg333307
28.0891 Ahg891275 thionin 2.2
32.4037 Ahg331950
32.5883 Virus0588
45.1664 Ahg907557
45.1664 Ahg896857
66.8132 Ahg489254 Mitochondrial transcription termination factor family protein
77.6917 Ahg909160
78.5557 Virus0374
78.5557 Virus0739
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression