Detail



ID : Ahg939040

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939040|scaffold_503231.1
Sequence
TAATGGGGAT TGAGATCAGA TATGAACTTG GCACTTGTTT TTGGCACAAA TGTAGTTCGT AAAGCTTATC GCTTTCTCTT CAGCTCCAGA AAATTCTGCA ATGGGAACTT TGGTGGTGAT GAAATCGATA ATGGTTTCCC TGAATTAGAT TTGGATTGTG GATTTGACGA GGAATCCAAT ATCACTGAGC TCAAAAGCAT CGATCGAGAA GTGATCTCTG TTCGGAGTAG GTTTTTGGAG AGTGCCAAGG TTGGTGCGTC TCGTGTTCTC GAGACATTGC AGCTAGATGA ATCTGGATTT AATACAAAGT CAGTTTTAGA TGAATTGAAT GTTAGAGTCT CAGGGCTTCT AGTGAGGGAG GTTCTTGTAG GGATCTTAAG GAACTTGAGT TATGATAATA AGACCAGATG TGCGAGATTA GCTTATAGAT TCTTCGTGTG GTCTGGAGAA CAAGATTGTT TCAGGCACAC AGTGAATTCT TATCATCTGC TTATGAAGAT ATTTGCAGAA TGTGGAGAGT ATAAGGCAAT GTGGAGATTA GTTGATGAGA TGGTTCAAGA CGGATTCCCG ACAACAGCGA GGACGTTTAA TCTGTTGATT TGTAGTCGCG GTGAAGCAGG TTTGGCGAAA CAAGCTGTTG TGCAGTTTAT GAAGTCCAAG ACTTTCAATT ACCGACCTTT CAAACACTCT TATAACGCAA TTTTGAATTC TTTGCTAGGT GTAAGACAGT ATAAATTGAT CGAGTGGGTT TACGAGCAGA TGTTAGAAGA CGGGTTTTCG CCTGATGTTC TGACTTATAA CATTCTCTTG TGGACAAACT ATAGGTTAGG GAAAATGGAT AGATTCGACA GGCTGTTTGA TGAGATGGCT CGAGATGGGT TGTCTCCGGA TTTCTACACA TACAACATTT TGCTGCACAT TTTGGGGAAA GGAAATAAAC CGCTCGCTGC TCTTACTACG TTGAACCATA TGAAGGAAGT AGGAATCGAC CTGAGTGTCC TCCATTACAC TACTTTGATA GACGGTCTGA GCCGTGCAGG GAATTTGGAG GCGTGCAAGT ACTTTCTAGA TGAAATGGTG AAAGCTGGGT GCAGACCGGA TGTTGTTTGT TACACCGTCA TGATAACAGG GTATGTTGTA TCTGGAGAGC TCGAGAAGGC AAAGGAGATG TTTAGAGAGA TGACGGTAGA AGGGCAATTA CCGAATGTAT TCACATACAA CTCGATGATT CGCGGGTTGT GTATGGCGGG AGAGTTCAGA GAGGCGTGTT GGTTGCTAAA GGAAATGGAA TCTAGAGGGT GTAACCCGAA TTTCGTAGTG TATAGTACAC TGGTTAGCTA TTTAAGAAAG GCAGGGAAGC TTTCAGAGGC TCGCAAGGTA ATAAGAGAGA TGGTGAAGAA AGGACACTAT GTTCATTTAG TTCCAAAGAT GTTGAAATAT AGGAGATGAT AGAGTTTTGT TTTGTTAATT 
Length1470
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18580171.. 18581640
Download Sequence
A.thaliana
AGI-codeAT3G60050.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.06226 Ahg490287 Kinase interacting (KIP1-like) family protein
13.7477 Ahg495386 DNAJ heat shock N-terminal domain-containing protein
25.2587 Ahg470669 glucan synthase-like 7
30.2985 Ahg472977 TBP-associated factor 4B
42.2137 Ahg947629 myb family transcription factor
45.5192 Ahg477634 O-fucosyltransferase family protein
51.517 Ahg950873
64.792 Ahg474843 MBOAT (membrane bound O-acyl transferase) family protein
67.2384 Ahg473598 Protein of unknown function (DUF803)
67.3053 Ahg490016 YTH family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression