Detail



ID : Ahg939472

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939472|scaffold_600016.1
Sequence
TTGACACCGG AGACTCCTCG GATGCATCGA CTGCTACTGG AATCCCACGG CGGCGGGAAC GAGACGAGCG GCGGCGGCGG AGATGGGTAC CTGAGAGACA TGAACTTCGA CGCAAACATG GTGATCATAC TTGCAGCTCT TCTGTGCGCG TTGATACTAG CGCTTGGGCT GAATTCGATT CTCCGATGCG CGATGCGATG CGGTTTCGGG TTATCATCCT CTGCGGCGGC AGGGACGGTG GCCGACAGAA GTGGATTGAA GAAGAGAGAG CTGAAGAAGT TTCCTGTAGC TGCGTACGGG TCGGGGGAAG TGAAGATAGC GGCGACGGAA TGCGCAATCT GTTTGGGAGA ATTCGCGGAC GGCGAGAGAG TGAGAGTTCT GCCGCCGTGT AATCACAGCT TCCACATGTC ATGCATCGAC ACGTGGCTTG TCTCTCACTC TTCATGTCCC AATTGTCGGT ATTCACTCAT CGAGGTCCAC GTGGTGGGAT CAGAGTGATT TAATTATCGT CGTGGGGT 
Length518
Protein Sequence
Protein Residue
Map Locationscaffold_6: 55747.. 56264
Download Sequence
A.thaliana
AGI-codeAT5G01880.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[DAFL2][DAF-Like gene 2]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg489269 sigma factor E
7.54983 Ahg485777 Regulator of chromosome condensation (RCC1) family protein
9.69536 Ahg483843 pseudo-response regulator 9
14.9666 Ahg496615 dentin sialophosphoprotein-related
16.0935 Ahg897595 cycling DOF factor 3
17.6635 Ahg490889 cytochrome P450, family 81, subfamily H, polypeptide 1
19.2873 Ahg496897 zeaxanthin epoxidase (ZEP) (ABA1)
21.4942 Ahg945327 B-box type zinc finger family protein
22.9783 Ahg904747 Protein of unknown function (DUF760)
23.3452 Ahg495528 B-box type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression