Detail



ID : Ahg940407

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940407|scaffold_600951.1
Sequence
TCAAGAGTTT GGAAAAGTTA TTATGGTAAG TCAATCAGCT GGTCAAACAA GATTTCGAAC ATTCAAGTAC GAGAACAACG GAGACTCTAG CAGACCAACA ATTGTAGTCA GAGTTATTGC TTGCTTTCAA CCGATGGATA ATTGTCAGGC TGAATACTTT AGACATATAC TCAAACCAGT GACGTAGTTG GTTTGTGAGC TTGTGTT 
Length207
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3618601.. 3618893
Download Sequence
A.thaliana
AGI-codeAT5G09463.1
Descriptionconserved peptide upstream open reading frame 41
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF41 represents a conserved upstream opening reading frame relative to major ORF AT5G09460.1
Alias[CPuORF41][conserved peptide upstream open reading frame 41]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg936535 Plant self-incompatibility protein S1 family
11.3137 Ahg941861 GRAM domain-containing protein / ABA-responsive protein-related
12.9615 Ahg915392 Eukaryotic aspartyl protease family protein
27.2029 Ahg471970 Disease resistance protein (TIR-NBS class)
57.4456 Virus3098
69.282 Ahg495210
70 Ahg918770
85.9942 Ahg940824
89.2637 Ahg489143
90.5097 Ahg908232 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression