Detail



ID : Ahg941394

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941394|scaffold_601938.1
Sequence
TGTATCGATC TTTGTGTGAA ATGGAAGTTT CAGTGATTGG AAATCCTCAA GCGAGGATCT GCAGAGCAGA ATTAGCTTAC AGAGAGCTCG GCTTTAGATT TGGCTCCGTT GTAATCTCCG GTGAATCGAG AAATAGGGTT ACTTTCTGCA ACCAAAGCTC TAAATGGAAG GAGATCGCGA TTCGTTGCTC TCACAGATCT GTCAAATGTG AAGCCATCGT CCCCGATGAC GCTCCTCCGT TTCTCAAATC CGCCCCAAAA CCTAAATCGC TCGAGAGTGT GAAATTATTT GTTGGGCTTC CACTGGACAC AGTTTCAGAC TGCAACAACG TGAATCACTT GAAAGCCATC ACAGCTGGGC TCAAAGCTTT GAAGCTACTT GGTGTAGAAG GCATTGAGTT ACCAATTTTC TGGGGAGTTG TTGAGAAGGA AGCTGCTGGG AGATATGAAT GGTCAGGGTA CTTGGCAGTA GCTGAGATTG TTAAGCAAGT GGGACTTAAG CTTCATGCTT CACTTTCTTT CCACGGATCG AAACACCCGG AGATAGGTCT TCCTGACTGG GTGGCAAAGA TTGGTGATGC TGAACCTGGG ATATATTTTA CAGACAGATA TGGGCAACAG TACAAAGATT GTTTGACGTT TGCAGTTGAT GATGTTCCTG TTCTTGGTGG GAAGACTCCT ATGGAGGTTT ACAGAGGTTT CTGTGATAGC TTCAAGTCTG CTTTTTCAGA TTACATGGGC AACACAATCA CGGGAATCAC ATTAGGTTTG GGACCAGACG GTGAGCTAAG ATATCCTTCT CATCAACACG ATGTCAAGCG CTCTGGCGCG GGAGAATTCC AGTGTTACGA CAAACACATG CTTTCCGCTC TCAAAGCCTA CGCTGAATCA ACTGGAAACC CTCTTTGGGG TCTCCGTGGT CCACACGATG CTCCTGCTTA TGATCAACAG CCTAATTCCT CTTCATTCTT CTTAGACGGC GGGTCCTGGG AATCTCAGTA CGGAGATTTC TTCTTGTCTT GGTATTCGTC TCTTCTCTCC TCCCACGCAG ACCGAGTTCT CTCAGTTGCT TCATCTGCAT TTAGCGGGAT TGGAGTGCCT CTATGTGGGA AGCTACCTCT CTTACACCAA TGGCACAAGC TAAGATCTCA GCCTTCTGAG TTAACAGCTG GATTCTACAG CTCTAATGGT CAGGACAGGT ACGAGGCTAT CGCAGAGATC TTTGCAAAGA ACTCATGTAG AATGATAATA CCGGGAATGG ATCTATCCGA CGAGCATCAG TCACCTGAAT CTCTCTCGAG CCCCGAGTCA TTACTTACCC ACATCAAAAC ATCCTGCAAG AAACAAGGAG TCGTTGTTTC AGGGCAAAAC TCGTCCACCC CGGTGCCTGG TGGGTTTGAG AGGATTGTTG AGAATCTGAA GGATGGGAAT GTAGGAATTG ATCTGTTCAC TTACCAGAGA ATGGGAGCAC TCTTCTTCTC TCCAGAGCAT TTCCATGCAT TCACAGTCTT TGTCCGGAAC CTGAGCCAAT TCGAGTTGTC CTCAGACGAT AAAGCAGCAG ATGTTGAAGA CGAGACAGTG AGCATAGGTT CAGGCACTGG TGCACCTAGT TTGCAAACCG CTTAATGAAA TGCAAAATCA TATTTTTATG TAAATACGAA AAGTCTCCTG TTGTTTTAGC ATTTATATAG ATTGTCATAT 
Length1700
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7432412.. 7434377
Download Sequence
A.thaliana
AGI-codeAT5G18670.1
Descriptionbeta-amylase 3
TAIR curator summaryputative beta-amylase BMY3 (BMY3)
Alias[BAM9][BMY3][BETA-AMYLASE 9][beta-amylase 3]
Gene coexpression
MR
MR Locus Description
1 Ahg481966 Phototropic-responsive NPH3 family protein
1.41421 Ahg926342 trehalose-6-phosphatase synthase S8
2.82843 Ahg484412 Octicosapeptide/Phox/Bem1p family protein
3.74166 Ahg941391 CHY-type/CTCHY-type/RING-type Zinc finger protein
4.69042 Ahg941688
4.69042 Ahg480112
4.89898 Ahg476649 J-domain protein required for chloroplast accumulation response 1
5.47723 Ahg924442 Polyketide cyclase/dehydrase and lipid transport superfamily protein
6.08276 Ahg489028 5'-AMP-activated protein kinase beta-2 subunit protein
6.16441 Ahg484691 Protein of unknown function (DUF179)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression