Detail



ID : Ahg941744

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941744|scaffold_602288.1
Sequence
TGTGAAATCT GAAGTGCGCC ATGACTGAAG TCCTTCACTT TCCTTCATCT CCAAGCGCTT CTCCTTCATC TTCTTCTTCT TCTCCTTCAC CTTCTTCTTT ATCTTACGCC TCTCGCTCCA ATGCGTCTCT CTTGATTAGC TCTGACCATA ACCGGAGAAA CCCAGTTCCT GGATTCGATC AAGATGTTGA CTTTCATGGC TCAATCGAAG AACAAGATTT GAGAAGAAGA CGGAGCGGTA ATGTCGGAGA AGAAGACGAT GGTGGGGAAG ATCAGATTTC GTTGTTGGCT CTTCTTGTCG CTATTTTCAG GAGATCTTTG ATTTCTTGCA AGAGTAATCG GAGAGAGCTC TGTAGCATGG AGATTGGATG GCCTACCAAT GTCCGACACG TGGCGCACGT TACCTTCGAT CGTTTCAATG GCTTCTTGGG TTTGCCTGTT GAATTCGAGC CTGAAGTTCC AAGAAGAGCT CCAAGCGCCA GTGCAACAGT CTTTGGGGTA TCAACCGAAT CAATGCAATT ATCATATGAT TCAAGAGGCA ATTGTGTACC AACCATACTC TTGTTGATGC AAAACTGTTT ATACAGTCAA GGAGGCTTGC AGGCAGAGGG CATTTTTAGA CTCACTGCTG AGAATAGTGA GGAAGAGGCG GTTAGGGAAC AACTAAACCG CGGATTTATA CCTGAGAGAA TCGATGTTCA CTGTTTGGCA GGGCTTATCA AGGCATGGTT TAGAGAACTG CCTACAAGCG TTCTTGATTC GTTGTCGCCT GAACAGGTGA TGCAGTGCCA AACAGAAGAG GAAAATGTAG AGCTCGTTAG GCTTCTTCCA CCTACAGAAG CTGCTCTGCT TGATTGGGCC ATCAATCTAA TGGCAGATGT TGTTCAGTAT GAACATCTTA ACAAGATGAA TTCACGCAAC ATCGCTATGG TTTTCGCACC GAATATGACA CAGATGGATG ATCCATTGAC AGCACTGATG TATGCGGTTC AAGTCATGAA TTTTCTCAAG ACACTGATCG ATAAAACACT ACGGGAGAGG CAAGACTCGG TGGTTGAGCA AGCTCATGTA TGCCCTTTAC AACCTTCTGA TGAGAGCGGT CACCAAAGCC CTTCACAGTC TTTGGCTTTT AACACCATTG AACAGAGTGA AGAAACGCAA TCAGACAACA TCGAAAATGC TGAAAATCAG AGTTCAAGCA GTGAGATATC AGACGAATTA ACCCTAGAGA ACAATGCATG TGAACAGAGA GAATCAGACT CTGGAAAATG CAGGACCAGG GGATTGAGCG ACTCAGGTGT ACAGTTGCTG ACTCTGGCTC CTCCAGCTCA GTGGCCTGTG GGCAGAACAA AGGGATTGAC CAACTTGAGC CGTGTAGGAT CTAGGGTAGA GCGTACTGAA GCTTGGCGGT GAAGATAATG GAGCAGTGAA TC 
Length1432
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8892171.. 8894568
Download Sequence
A.thaliana
AGI-codeAT5G22400.1
DescriptionRho GTPase activating protein with PAK-box/P21-Rho-binding domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.9722 Ahg484671 expansin A5
21.4476 Ahg476233 ARM repeat superfamily protein
40.4722 Ahg486596 Thioesterase superfamily protein
40.5709 Ahg929671
46.6047 Ahg471148 glutathione S-transferase TAU 18
50.2991 Ahg481725 nucleobase-ascorbate transporter 12
52.6213 Ahg485020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
55.6776 Ahg489481 P-loop containing nucleoside triphosphate hydrolases superfamily protein
56.6833 Ahg906386 oxidoreductases, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;copper ion binding
57.376 Ahg472578 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression