Detail


ID : Ahg942355

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942355|scaffold_602899.1
Sequence
GTTTTGGGAT TCCAGAGCTA ACAATGGATC CCATAAAGCA AATCTCTTTA CTAGTTCTTC TCTTCTTTCT ACTTTTATCC GGGTCGGCGG GTCAGCCCGG ATCCCCAAAC CCGAGAAGTG ACCAATATGC TTACAGCGGC AGTCTTAGTC CCGCCATGGC TGTTGTCGTT GTAGTCGTCA TCGCAGCTCT CTTCTTTATG GGCTTCTTCA CCGTCTACAT ACGCCACTGT ACTGGCGCAG TAGACGGCAA CGTTACTCCT ACAGGAGGAG CGAGGAGGAG AGTAACAAAC GCAACGGTGG CGCGTGGGTT AGACGCGGAG ACTATCGAGA CGTTTCCGAC TTTTGTATAC TCGGAAGTGA AGACTCAGAA GATTGGTAAA GGAGCGTTGG AGTGTGCGAT TTGTTTGAAT GAGTTTGAAG ACGACGAAAC GCTGCGTTTG TTACCTAAAT GTGATCACGT GTTTCATCCT CATTGTATAG GCGCGTGGCT TGAAGGTCAC GTGACTTGTC CGGTTTGTCG GACTAATCTC GCCGAACAGA AGATTGAACC GGTTGAACCG GAAGCGGTGG TGGAAATTGA TCTTGAAGCG CAGCAGCAAG CGGCGGTTCC TGAACCGGTG GTGGAACTAC CACGTGTAAA TTTCTCGAGG TCGCATACGA CGGGTCATTC GGTGGTTTTA CCGGGAGAAA GTACCGACCG GTTTACGCTT AGAGTACCGG AAGAATTAAG GAAGAAGATA ATGGCGAATT GGAAATTGAA CCGGTCGAAT AGTGTTTTTG TTCTACCGAG AGGAGGAAGC TCGAGGAGTG GTAAACCGGT TGACCGGTCG AGAGCTAAAT CGGACCGGTG GTTATTCCGT AAAACCCCGT CGTTTCTGTG GCGGAACCGG GATGATGGTT CGATTAGGCT TGGTGGAACC GGTAGCGTTA GAGGAAATTC AGTAACAAGT CCGACCGGTG ACTCGGTACG AGCAGACCGG TGGGCTTTTC TAAGAAACCC ATCGTTTCTC TGGAGGAATA CGACGCCGGT TCCTTCGCCG AGAGTTGAAG TCAATAAGGA CGGTGAAGGA ACATCGTCGG TTCAACATAC CGGTACAGTT GGTTCAGCTA GCGGTTCCGT TAGATTACCG GTTTAGTTGG TTTGGTGATG TTTTTT
Length1156
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT5G27420.1
Descriptioncarbon/nitrogen insensitive 1
TAIR curator summaryEncodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings.
Alias[ATL31][CNI1][Arabidopsis toxicos en levadura 31][carbon/nitrogen insensitive 1]
Gene coexpression
MR
MR Locus Description
1 Ahg485608 syntaxin of plants 122
2 Ahg495340 Heavy metal transport/detoxification superfamily protein
2.23607 Ahg482857 WRKY DNA-binding protein 33
2.44949 Ahg921472 Matrixin family protein
3.4641 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
4.89898 Ahg492972 heat shock transcription factor A4A
6.7082 Ahg480770
7.74597 Ahg327563 senescence-associated gene 21
8.24621 Ahg344960 Exostosin family protein
8.48528 Ahg933765 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression