| Annotation |
|---|
| Description | jgi|Araly1|943148|scaffold_603692.1 |
| Sequence |
TTTGCAAGAG AGAAAACAAG AAATGGATTT GTTCAAGATC CTGCTTCTTG TGTTCTTCGT GAACATAAGT TTCTGCTTCG CTGCAGATCC TTATTCTTTC TATAACTTCG AAGTCTCCTA CATTACTGCT TCTCCACTTG GTGTTCCTCA ACAGGTCATT GCTATAAATG GAAAGTTTCC TGGTCCTACA ATCAATGTTA CAACCAATGA AAATCTGGTT GTTAATGTCA GAAACAAATT GGATGAGGGA CTTCTTCTTC ATTGGAATGG AATCCAACAG AGACGTGTTT CATGGCAAGA TGGAGTTTTA GGAACCAATT GTCCTATTCC TCCAAAGTGG AATTGGACTT ATGAGTTTCA AGTTAAGGAC CAAATTGGGA GTTTCTTCTA CTTTCCTTCT CTCCATTTCC AGAAAGCTTC TGGTGGTTTT GGCTCCTTCA TTGTCAATCC TAGAGCGATT ATTCCAGTCC CTTTCTCGAC TCCAGACGGC GATATTACCG TTACGATTGG TGATTGGTAC ATAAGGAACC ACACGGCTTT GAGGAAGGCT TTAGATGATG GTAAAGATCT TGGAATGCCC GATGGAGTTC TTATTAACGG AAAAGGACCT TACCGATACA ATGACACTCT TGTTGCTGAT GGGATTGATT TTGAAACAAT CACAGTCCAT CCTGGGAAAA CTTATAGACT TCGAGTGTCA AATGTGGGAA TTTCGACGAG CTTGAACTTT AGGATTCAAG GTCACAACTT AGTTCTTGCG GAATCCGAAG GATCGTACAC AGTTCAACAA AACTACACTA GCTTGGATAT TCATGTTGGG CAGTCTTATT CATTCTTGGT TACAATGGAT CAAAACGCGA GCTCTGATTA CTATATTGTT GCGAGTGCTC GGGTTGTTAA TGAAACCATA TGGAGAAGAG TTACTGGAGT TGGAATCTTA CACTATACCA ACTCTAAAGG AAAAGCTAAA GGTCACTTAC CGCCTGGACC ACTAGACGAA TTCGACAAGA CTTTCTCCAT GAATCAAGCA AGATCCATCA GATGGAATGT ATCAGCAAGT GGTGCGCGTC CTAACCCGCA AGGCTCGTTT AAATATGGTT CAATCAATGT AACCGATGTC TACGTTCTGA GGAATATGCC GCCTGTGACG ATTAATGGGA AGCGAAGAAC AACTCTTAAT GGCATATCGT TTAAGAATCC TTCTACGCCT ATTAGACTAG CCGATAAGTT TAAAGTTAAA GATGTGTATA AGCTTGATTT CCCTAAGAGA CCTTTAACTG GACCGGCCAA AGTGGAGACT TCGATTATCA ATGGCACTTA TCGTGGATTC ATGGAAGTCG TTCTTCAAAA CAATGACACT AAGATGCAAA GCTATCACAT GAGTGGCTAC GCCTTTTTTG TCGTCGGTAT GGATTACGGA GAGTGGACAG AGAACAGTAG AGGAACATAC AACAAATGGG ATGGTATCGC CCGCTCCACT ATTCAGGTGT ATCCAGGGGC ATGGTCAGCG ATCTTGATAT CAATGGACAA TCCTGGAGCT TGGAATCTAA GAACAGAGAA TCTTGATTCT TGGTATCTTG GACAAGAAAC TTATGTTAGA GTGGTTAATC CAGACGAAAA CAACAAAACC GAATTCGGGC ACCCTGACAA TGTTCTTTAC TGTGGTGCTC TCAGCAAACT ACAAAAGCCA CAGAAGATTT CATCGGCGGC GTCGAGAAGC ATTGGATTCA CGAGTCTTTC AATGGTGGTA ATGGCTTTGG TGATGATGAT GATGATTCAG CATTGAAATG TAATTTGAGG GTTTGT |
| Length | 1806 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 20746268.. 20749269 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G12420.1 |
| Description | Cupredoxin superfamily protein |
| TAIR curator summary | Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues. |
| Alias | [SKU5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg471076 | Eukaryotic aspartyl protease family protein |
| 5.47723 |
Ahg470115 | plasma membrane intrinsic protein 1C |
| 5.91608 |
Ahg496451 | tubulin beta chain 2 |
| 6.9282 |
Ahg485285 | IQ-domain 21 |
| 7.54983 |
Ahg941617 | germin 3 |
| 7.87401 |
Ahg480276 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 8.12404 |
Ahg941021 | early nodulin-like protein 17 |
| 8.3666 |
Ahg480225 | xyloglucan endotransglucosylase/hydrolase 4 |
| 8.83176 |
Ahg480375 | arabinogalactan protein 9 |
| 9 |
Ahg486262 | Basic-leucine zipper (bZIP) transcription factor family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|