Detail



ID : Ahg943245

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943245|scaffold_603789.1
Sequence
GAAAAGTCTC CCCCTTTAAT AATGGGTTGT TTCAGCAGTA AACACCGGAC AACTCAAAAC GACGGCGGAG AAAGATCAAA TCCGATCAAT CCAGTACAAA CCCATGTCGT TAATCAAGTC CCTGAGCATC GTGAACCTCA AATCCCAACA CCATCGGTAC CCATCTCAGT TCGAGATCCA GCGACGATAT TAGGTAAACC ATTGGAAGAC ATCAGGAGAT TCTACAGCTT GGGGAAAGAA TTAGGTCGAG GTCAATTTGG GATTACGTAT ATGTGTAAAG AGATTGGGAC TGGGAACAAT TACGCTTGTA AATCGATTCT CAAGAGGAAG CTAGTTAGTG AGAGAGAAGA TGTGAAGACA GAGATTCTTA AGAGGAAGCT AGTTAATAAG TATGATAAAG AAAATTTGAA GAGAGAGATT CAGATAATGC AGCATTTGTC TGGACAACCA AACATTGTTG AGATCAAAGG TGCTTATGAG GATAGACAGT CTGTGCATTT GGTAATGGAG TTGTGTGCTG GTGGTGAGTT GTTTGATAGG ATTATAGCTC AAGGTCATTA CTCTGAGAGA GCTGCTGCTG GTATCATTAG GTCAATTGTG AATGTTGTTC AGATTTGTCA TTTGAAGGGT GTGATTCATC GAGATCTCAA GCCTGAGAAT TTCTTGTTCT CGAGTAAAGA GGAGAATGCA ATGCTTAAAG TAACCGATTT CGGGTTGTCC GCGTTCATCG AAGAAGGAAA AGTTCACCAG GATGTAGTTG GGAGCCCTTA CTACGTTGCT CCTGAAGTAT TAAGGCGAAG TTACGGGAAA GAAATCGATA TTTGGAGTGC AGGTGTCATT TTATACATCC TACTCAGCGG TGTGCCTCCT TTTTGGGCTG ACAATGAGGA TGGAATATTC GTTGAGATTC TAAAAGGCGA AATTGATGTT GAAAGCCAAC CATGGCCTTC TATATCTGAG AGCGCGAAAG ATCTTGTTAG AAAGATGCTA ACCAAAGACC CGAAGAGACG AATCACGGCT GCACAGGTTC TTGAACATCC TTGGATCAAA GGGGGAGAAG CACCGGACAA GCCTATTGAT AGCACTGTGT TATCCCGTAT GAAGCAATTC CGAGCAATGA ACAAGCTTAA GAAGCTAGCT CTAAAGATTA GCGCGGAGAG TCTATCAGAA GAGGAGATCA AAGGTCTTAA AACCATGTTT GCGAATATGG ATACCAATAG AAGCGGGACA ATCACTTATG AACAACTCAA AACTGGGCTA AGTAGACTTA GGTATAGATT CTCTGAAACT GAAGTTAAGC AACTCATGGA AGCGGCTGAT GTGGATGGTA ATGGAACAAT TGACTACTAT GAGTTTATCT CTGCGACAAT GCATAGATAC AAATTAGATC GAGATGAGCA TGTACACAAA GCATTCCAAC ACTTTGATAA AGACAACAAC GGGCACATAA CTAGGGATGA GTTGGAAAGT GTCATGAAGG AATATGGAAT GGGAGATGAA GCTAGCATCA AAGAAGTTAT ATCCGAAGTT GATACCGACA ATGATGGAAA AATAAACTTT GAGGAATTTT GTGCGGTGAT GAGAAGCGGC ACCACACAAC CAAAAGGGAA ACTGTTTCCA TTCCACTGAT CAAGACTACA TAGATCCCA 
Length1649
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21169898.. 21172828
Download Sequence
A.thaliana
AGI-codeAT4G04720.1
Descriptioncalcium-dependent protein kinase 21
TAIR curator summarymember of Calcium Dependent Protein Kinase
Alias[AtCPK21][CPK21][calcium-dependent protein kinase 21]
Gene coexpression
MR
MR Locus Description
18.7083 Ahg490295 bZIP transcription factor family protein
28.8271 Ahg474163 P-loop containing nucleoside triphosphate hydrolases superfamily protein
31.9844 Ahg946280 Proteasome component (PCI) domain protein
34.0588 Ahg473189 Magnesium transporter CorA-like family protein
35.242 Ahg897711 SWIB complex BAF60b domain-containing protein
51.672 Ahg490075 Phosphofructokinase family protein
54.4977 Ahg330836 Leucine-rich repeat protein kinase family protein
58.515 Ahg478307 Protein kinase superfamily protein
59.9083 Ahg482876 Amino acid dehydrogenase family protein
72.6498 Ahg940051 Protein of unknown function (DUF1022)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression