Detail



ID : Ahg943760

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943760|scaffold_604304.1
Sequence
CTGCTGCGAT ACACAGATTT AGGATGAGCC AATGTGTTCC AAACTGTCAC ATCGATGATA CTACGGCAGC CGCAGCAGCC ACCACCACCG TCCGCTCCAT CACAGCAGCG GACATCCCCA TATTAGACTA CGAGGTAGCC GAGCTGACGT GGGAGAACGG GCAACTGGGC TTGCACGGCT TAGGTCCACC GCGAGTGACG GCTTCGTCGA CCAAGTACTC CACAGGCGCC GGTGGAACGT TGGAGTCGAT AGTGGACCAA GCTACTCGCC TCCCTAACCC TAAGCCCACG GATGAGCTCG TCCCGTGGTT CCACCATCGC TCTTCCAGGG CCGCCATGGC CATGGACGCG CTTGTCCCTT GCTCCAACCT AGTACAGGAG CAGCAGAGCA AGCCCGGTGG CGTTGGCTCC ACCCGGGTGG GGTCATGTAG CGATGGTCGT ACCATGGCCG GTGGAAAACG AGCCAGAGTG GCGCCGGAGT GGAGCGGGGG CGGGAGTCAG CGGCTGACCA TGGATACTTA CGACGTAGGT TTCACCTCAA CATCCATGGG CTCGCATGAT AACACCATCG ACGATCATGA CTCCGTCTGC CACAGCCGCC CACAGATGGA GGACGAAGAA GAGAAGAAAG CCGGAGGCAA ATCATCAGTT TCAACCAAGA GAAGCAGAGC TGCTGCTATT CATAACCAAT CCGAACGTAA GAGGAGAGAT AAGATCAATC AAAGGATGAA GACTTTGCAG AAACTGGTTC CCAATTCCAG CAAGACGGAT AAAGCATCTA TGTTGGATGA AGTGATAGAG TACTTGAAGC AACTTCAAGC ACAAGTGAGC ATGATGAGCA GAATGAACAT GCCTTCCATG ATGCTTCCTA TGGCCATGCA GCAACAACAA CAACAACTAC AAATGTCTCT CATGTCCAAT CCCATGGGTT TAGGGATTGG CATGGGGATG CCCGGTCTCG GTCTCCTCGA CCTTAATTCT ATGAACCGAG CTGCTGCTGC TGCAACCGCT CCTAATATCC ATGCCAACGT GATGCCAAAC CCATTTGCGC CCATGACTTG TCCATCGTGG GATGCTTCTT CCAACGACGC TCGATTTCAG TCTCCTCTCA TTCCCGATCC TATGTCTGCC TTTCTTGCAT GCTCGACTCA GCCAACGACG ATGGAAGCAT ATAGCAGGAT GGCTGCATTA TATCAGCAAA TGCAACAACA ACTTCCTCCT TCGAATCCAA AATGATTATT TGAACACGTC TATAT 
Length1255
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23483539.. 23485596
Download Sequence
A.thaliana
AGI-codeAT4G00050.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[UNE10][unfertilized embryo sac 10]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg491144 catalase 2
8.42615 Ahg922501 one-helix protein 2
9 Ahg481465 glycine decarboxylase P-protein 2
10.3923 Ahg922817 plastid movement impaired1
11.3578 Ahg940842 Pentatricopeptide repeat (PPR-like) superfamily protein
15.4919 Ahg331125 Leucine carboxyl methyltransferase
15.8745 Ahg935146 phosphoenolpyruvate carboxylase 2
16.9706 Ahg471868 high chlorophyll fluorescence phenotype 173
17.1464 Ahg480385
17.5784 Ahg472589 glutamate:glyoxylate aminotransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression