Detail



ID : Ahg944003

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944003|scaffold_700232.1
Sequence
AGAGAGAAGA GAAAATCTCT CATGGCTCTT TCAAACGCCT CCTCTCTCTC CGCCAGATCT ATCTACGGCG GCGGCGACGC TCGTATTTCT CACCGTCAGA GCAACCGTCA ATCATCCTTC ACATTTCATC CCGCCGTCAA CACCAAGCTT AAGTCCGTTA ACCTCGTTAC GGCGGTACAC GCGGCTGAGC CAGCTAGAAA CGCTGTTTCT GTTAAGGAAT CCGTTGCGCC GTCGTCGTCT GGTGCATTGA AATGGACTCC AGAGAGCTGG AAATTGAAGA AAGCTCTGCA ACTTCCTGAT TACCCTAACG CTAATGAGCT TGAGTCTGTG CTTAAGACGA TTGAGGCTTT CCCTCCGATT GTCTTCGCCG GAGAAGCTAG AAATCTTGAA GAGAGATTGG CTGATGCTGC TGTTGGTAAA GCTTTTCTTC TCCAAGGAGG TGATTGTGCT GAGAGTTTCA AGGAGTTCAA TGCTACTAAT ATCAGAGATA CCTTTAGGGT TTTGCTTCAG ATGAGTATTG TTCTTACATT CGGCGGCCAA GTTCCGGTCA TTAAGGTTGG GAGGATGGCT GGTCAATTTG CCAAGCCTAG ATCTGATCCA TTTGAGGAGA AGGATGGAGT GAAATTACCT AGCTACAAGG GAGATAACAT CAATGGTGAC ACTTTTGATG AGAAATCTAG AATTCCTGAT CCTAATAGGA TGATTCGTGC TTACACACAA TCTGCTGCTA CTTTGAATCT TCTTAGAGCC TTTGCCACTG GAGGTTATGC TGCTATTCAA AGAGTTACTC AATGGAACCT TGATTTTGTT GAACAAAGTG AGCAAGCTGA CAGGTACCAG GAATTAGCTA ACAGGGTTGA TGAGGCCTTG GGGTTTATGT CTGCATGTGG ACTTGGCACG GATCATCCAC TCATGACTAC AACTGATTTC TACACATCAC ATGAGTGTTT GCTTCTGCCT TATGAACAGT CGCTTACAAG GTTGGATTCA ACTTCTGGTC TGTACTATGA TTGTTCTGCA CACATGGTGT GGTGCGGAGA GCGTACCAGA CAATTGGATG GTGCTCATGT CGAGTTTCTC AGGGGGATTG CTAATCCTCT GGGCATTAAG GTGAGCAATA AAATGGATCC CAATGAGCTG GTCAAGCTAG TAGAAATCCT GAATCCTAAC AACAAGCCTG GAAGAATCAC TGTAATTGTG AGAATGGGTG CCGAGAACAT GAGAGTTAAG CTTCCCCACC TGATCAGAGC AGTCCGCAGA TCAGGCCAGA TTGTGACATG GGTCTGTGAT CCAATGCATG GAAACACTAT CAAAGCACCT TGCGGTCTGA AAACACGTGC CTTTGACTCA ATCCTGGCTG AAGTCCGAGC ATTCCTTGAT GTGCACGAAC AAGAAGGAAG CCATGCTGGT GGTATCCATC TTGAGATGAC AGGACAGAAC GTGACAGAAT GCATTGGAGG GTCCCGCACT GTGACCTACG ATGACCTCAG TTCTCGCTAC CACACACACT GTGACCCAAG GCTGAACGCG TCACAGTCTC TTGAACTGGC TTTCATTGTT GCAGAACGGC TCAGGAAGAG AAGAACTGGT AGCCAGCGAG TGTCTTGAGT GTGGTTTTTC CTTAATAT 
Length1628
Protein Sequence
Protein Residue
Map Locationscaffold_7: 807329.. 809494
Download Sequence
A.thaliana
AGI-codeAT4G39980.1
Description3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1
TAIR curator summaryEncodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.
Alias[DHS1][3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg477961 O-acetyltransferase family protein
5.47723 Ahg484876 arogenate dehydratase 4
5.65685 Ahg483224 Embryo-specific protein 3, (ATS3)
7.28011 Ahg487374 anthranilate synthase alpha subunit 1
8.77496 Ahg478929 Lactate/malate dehydrogenase family protein
9.05539 Ahg339769 AMP-dependent synthetase and ligase family protein
9.59166 Ahg488196 zinc induced facilitator-like 1
9.64365 Ahg934322 methionine adenosyltransferase 3
9.8995 Ahg331293 peroxisomal 3-keto-acyl-CoA thiolase 2
10.4403 Ahg476412 translocase inner membrane subunit 23-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression