Detail



ID : Ahg945245

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945245|scaffold_701474.1
Sequence
TTCGGGTAAA AAAAAAGTTA AATGGTTGAA GCAGAGCGCG CGGAGAATAG TTGGATTGCT TCGGAAATGT CGTCGTCGTC GTCTCCGGCG GCAATAGAAA GCCGTGATTT TTCGATCATT GATTCGAGTG ATGGTGGAAT AAGAGATGTG AGAGGATTTG GTATAGCTTC TCGGCCTCAG TTGGAGAAGG GTTTGTCGGA AAACAATATA GGGTTCACGG AAAGAGTTTT CTCTGCCGCC GGAGCTGCGG TTTTGTCTGC TGTTACTTTA AATCCTCTTG ACGTTGTTAA GACTCGATTG CAAGCTCAAG CCGCCGGAAT GTCTTACTCT CACCCACTCA GTAACTCCAT TGGACGCATG GCATTTTTTG GACCAAACAT GATGTTTGCA GACTTGAGAT GTTCTCCTTC ATGTTCACGC GCTGGTGTTC AAGGTACTGT TTCTATTTGC CCACCGGATT GTTTCCAGTA CAAAGGAACT TTTGATGTCT TCACCAAGAT TATACGACAG GAGGGTCTAG CACGCCTTTG GAGAGGGACT AATGCTGGTC TTGCCCTAGC TGTGCCCATG GTTGGGATAT ATCTCCCATT CTATGATATG TTTCGCAACC GATTGGAAGA ATTATCTCGG GAGAAAGCTC CTGCTATGAC ATTTTGTGTG CCTACTGTGG CAGGGTCCTT AGCGCGGTCC TTAGCTTGTA CAGTGTGCTA TCCTATAGAT CTTGCAAGAA CGCGTATGCA GGCATTCAAA GAAGCAAAAG CTGGTGTGAA GCCTCCGGGA GTTTTTAAAA CTCTAGTTGG TGTATTCTCT GAAGTCAGGA CAGCAAATAA CCTTGAAAGT AGTTTGCACA ACTATCGTGT TCTCTGGAGA GGTTTGGGTG CACAGCTTGC CCGTGATGTT CCATTTTCAG CAATCTGCTG GTCGACCCTC GAGCCAATAA AAAAGAGGCT TCTTGGAGTT GCGGGCAATG ATACAAATCT TCTTGGTGTT TTCGGTGCAA CCTTTTCTGC TGGTTTTATA GCTGGTAGTA TCGCTGCTGC TGCTACTTGT CCTCTTGACG TTGCAAGAAC AAGAAGACAG ATAGAGAAGG ACCCTGGTAG GGCATTGATA ATGACGACAC GACAGACACT AATAGAGGTT TGGAGGGATG GAGGGATGAG AGGCCTGTTC ATGGGAATGG GTCCACGAGT GGCGCGTGCA GGACCGTCGG TAGGGATAGT GGTTTCCTTC TACGAAGTGG TCAAGTATGT TCTGCATCGC CATGCTTCAT CATGACCAGC AAAGTCACTA ATCTC 
Length1295
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5563444.. 5565812
Download Sequence
A.thaliana
AGI-codeAT4G27940.1
Descriptionmanganese tracking factor for mitochondrial SOD2
TAIR curator summary
Alias[ATMTM1][MTM1][ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2][manganese tracking factor for mitochondrial SOD2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg889417 Dynein light chain type 1 family protein
3.87298 Ahg312884 Basic-leucine zipper (bZIP) transcription factor family protein
9.48683 Ahg342260 B-box 32
10.198 Ahg488323 L-aspartate oxidase
13.0384 Ahg925155 lipases;hydrolases, acting on ester bonds
16.8819 Ahg479829
18.9737 Ahg481404 AFG1-like ATPase family protein
21.8174 Ahg921726 RING/U-box superfamily protein
27.6043 Ahg934499 SOUL heme-binding family protein
29.5635 Ahg487321 conserved peptide upstream open reading frame 64
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression