Detail



ID : Ahg945405

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945405|scaffold_701634.1
Sequence
TACCCTTGCG ATTCTCTGAA ATGAACCCTC AAGCTAATGA CCGGAAGGAG TTTCAGGGAG ATTGCTCGGC GACGGGAGAT CTCACGGCAA GGCACGATTC AGCTGGAGGA GGAGGAAATG GAGGTGGAGG TGCTAGGTAT AAGCTGATGT CACCGGCGAA GCTTCCGATC TCGAGGTCGA CTGATATCAC GATTCCTCCT GGGTTGAGTC CGACTTCGTT TTTGGAATCT CCTGTTTTCA TCTCCAACAT CAAGCCAGAA CCTTCCCCTA CTACTGGTTC TTTGTTCAAG CCTCGACCAG TGCACATTTC TGCTAGCTCA AGTTCTTATA CAGGTAGGGC GTTCCATCAG AACACCTTTA CTGAGCAGAA GTCCAGTGAA TTTGAGTTCA GACCTCCTGC ATCCAATATG GTTTATGCAG AGCTTGGCAA GCATAGAAGT GAGCCACCGG TACAATTTCA AGGCCAGGGC CATGGATCCG CACACTCACC TTCTTCACTC AGTGATGCTG CAGGTTCCTC AAGTGAGCTA AGCCGGCCAA CTCCTCCTCG TCAGATGACA CCAACGAGCT CAGATATTCC GGCTGGATCT GATCAAGAGG AATCAATCCA GACTTCCCAA AATGACCCCA GAGGAAGCAC ACCATCCATC TTGGCTGATG ATGGTTATAA CTGGAGAAAA TATGGTCAAA AACATGTCAA AGGGAGTGAA TTTCCCCGGA GCTATTATAA ATGTACACAT CCTAATTGTG AAGTGAAAAA GTTATTTGAA AGATCTCATG ATGGGCAGAT CACCGATATT ATATACAAGG GTACACATGA CCATCCTAAA CCTCAACCTG GTCGCCGAAA CTCTGGTGGT CTTGGTATGG CTGCACAAGA AGAAAGGCTA GACAAGTATC CTTCTTCAAC TGGCCGAGAT GAGAAGGGAT CTGGCGCCTA CAACTTGTCT CACCCCAATG AGCAAACTGG TAACCCTGAA ATACCTCCTG TCTCAGCATC TGAGGATGGT GGAGAAGCTG CAGCGTCAAA TAGGAATAAA GATGAGCCGG ACGATGATGA TCCATTCTCA AAACGGAGGA GGATGGATGG TGCGATGGAA ATAACTCCAC TTGTGAAACC CATCCGAGAG CCTCGGGTTG TTGTTCAAAC TCTGAGTGAG GTTGACATAC TGGATGATGG TTATAGATGG CGTAAATATG GGCAGAAAGT CGTAAGGGGG AACCCAAATC CCAGGAGCTA TTACAAATGC ACAGCTCCTA ATTGCCAAGT GAGAAAACAC GTGGAGAGGG CATCACATGA CCCAAAAGCT GTAATAACAA CATACGAAGG CAAACACGAT CACGATGTTC CCACTTCAAA GTCTAGCAGC AATCACGACA TCCAGCCTCG GTTCAGACCA GATGAAACAG ACACCATCAG CCTCAATCTT GGTGTTGGAA TCTCATCTGA TGGACCTAAC CACGCTTCCA ACGAGCATCA GCATCAGAAT CAACAACTCG TCAACCAAAC TCACCCAAAT GGAGTCAATT TCAGGTTTGT TCATGCTAGT CCCATGTCAT CCTACTATGC TAGCTTAAAT AGCGGTATGA ATCAGTACGG CCAGAGAGAA ACAAAGAACG AGACTCAGAA TGGCGACATC TCGTCCTTGA ACAATTCATC TTACCCATAT CCGCCCAACA TAGGGAGAAT ACAATCGGGT CCTTAAAAGA AAAAGTAAGC AACAGTAT 
Length1728
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6098466.. 6101965
Download Sequence
A.thaliana
AGI-codeAT4G26640.2
DescriptionWRKY family transcription factor family protein
TAIR curator summarymember of WRKY Transcription Factor; Group I
Alias[AtWRKY20][WRKY20]
Gene coexpression
MR
MR Locus Description
8 Ahg323893 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
8.3666 Ahg489475 TCP-1/cpn60 chaperonin family protein
9.16515 Ahg941582 Avirulence induced gene (AIG1) family protein
13.4907 Ahg488817 ARM repeat protein interacting with ABF2
22.9783 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
25.2587 Ahg482518 SWIB/MDM2 domain superfamily protein
30.8869 Ahg482201 LEUNIG_homolog
33.7046 Ahg476882 chromatin protein family
37.3497 Ahg488829 Telomerase activating protein Est1
39.3954 Ahg477651 TCP-1/cpn60 chaperonin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression