Detail



ID : Ahg945946

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945946|scaffold_702175.1
Sequence
CAGGGAAGAG TGGAAAAAAA ATGAGAGGTT CTTGCAAAGT CTCTATAGTT CTTCTTCTGG TTTTAATCAA TGGTGTGCTT GGAGATAACC CTTATAGATT CTTTACCTGG AAAATAACTT ATGGTGACAT TTATCCCCTT GGTGTTAAAC AACAGGGAAT ATTGATAAAT GGGCAGTTTC CTGGACCTCA CATTGACGCA ATCACAAATG ATAATATCAT TATTAGTGTT TTCAATTACT TGAAAGAGCC TTTCCTCATT TCTTGGAACG GAGTGCAACA GAGGAAGAAC TCATGGCAAG ATGGAGTCGT AGGGACAACA TGTCCAATTC CACCTGGCAA AAACTTCACT TATGTAATCC AAGTCAAAGA TCAAATTGGT AGCTTCTACT ATTTCCCTTC TCTTGCCTTC CACAAAGCCG CTGGTGCATT TGGAGCCATC CGTGTTTGGA GTCGTCCTCG CATCCCCGTC CCGTTCTCTC CCCCTGACGG TGACTTCTGG CTTCTCGCCG GAGATTGGTA CAAAACCAAT CACTATGTTT TGAGACGTCT ACTAGAAGCC GGAAGGAATC TACCGAATCC TGATGGAGTT CTCATCAATG GTCGAGGCTG GGGAGGCAAT ACCTTCACCG TTCAACCTGG TAAGACATAT AGATTTAGAA TATCAAACGT CGGGGTCGCG ACTTCATTAA ACTTCAGAAT CCAAGGACAC ACGATGAAGC TCGTTGAAGT AGAAGGGTCT CACACTGTTC AAAACATCTA CACTTCACTT GACATTCATT TAGGACAGTC TTACTCTGTT CTCGTGACGG CTAACCAAGC GCCTCAAGAC TATTACATCG TCATCTCCTC GAGGTTCACG CGAAAAGTCC TCACAACGAC TTCGATTCTC CATTACAGTA ACTCGAGAAG AGGCGTCTCT GGCCCTGTTC CAAATGGTCC CACTTTGGAC ATCGCATCTT CGCTCTACCA AGCTCGAACT ATACGGAGGA ATCTTACCGC GAGTGGTCCG AGACCAAACC CGCAAGGCTC GTATCATTAC GGTTTGATTA AACCAGGCCG TACGATCATA CTGGCCAACT CGGCTCCTTG GATCAACGGC AAGCAACGGT TCGCCGTGAA CGGTGCCTCG TTTGTTGCGC CTGACACACC ATTGAAGCTC GCCGATTACT TCAAGATTCC CGGAGTTTTT AACCTTGGAA GCATCCCAAC GAGTCCTTCT GGTGGAAACG GAGGGTACCT TCAAAGCTCT GTTATGGCCG CTAACTTCAG AGAATTCATC GAGGTTGTTT TCCAAAACTG GGAAAATTCA GTCCAGTCTT GGCACGTCTC CGGTTACTCT TTCTTCGTCG TCGGAATGGA TGGAGGACAA TGGACACCCG GAAGCCGATC AAAGTACAAC CTGCGGGATG CGGTTTCACG GTCCACCGTT CAAGTATATC CGAGGGCATG GACAGCGATC TACATAGCAT TGGATAATGT GGGGATGTGG AACATAAGGT CGGAGAATTG GGCAAGACAG TATTTAGGGC AACAATTCTA TCTCCGAGTT TACACTTCCT CTACTTCGTA CAGAGATGAG TATCCACCAC CAAAGAACGC TCTTATGTGC GGACTAGCTA GAGGCCGCCA CACCAGGCCA TTCTAAAAGG GATATTGGAC GCGACG 
Length1666
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8273623.. 8277195
Download Sequence
A.thaliana
AGI-codeAT4G22010.1
DescriptionSKU5 similar 4
TAIR curator summary
Alias[sks4][SKU5 similar 4]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg470654 Fatty acid desaturase family protein
2.64575 Ahg480107 FASCICLIN-like arabinoogalactan 7
3.87298 Ahg490872 arabinogalactan protein 18
4.47214 Ahg497154 FASCICLIN-like arabinogalactan 2
5.2915 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
5.74456 Ahg480193 O-Glycosyl hydrolases family 17 protein
6.32456 Ahg938360 Eukaryotic aspartyl protease family protein
7.2111 Ahg471076 Eukaryotic aspartyl protease family protein
7.34847 Ahg479888 xyloglucan endotransglucosylase/hydrolase 16
8 Ahg480375 arabinogalactan protein 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression