| Annotation |
|---|
| Description | jgi|Araly1|946393|scaffold_702622.1 |
| Sequence |
TCCACACTTT CCCCAAAGCT ATGGGATTCG AGAGCTCTTC CTCTGCTGCA AGCAACATGA AACCTCTTGG AGATTCCAAA CCTCAAAAAT CCAACACTGC TCAATACTCT GTTGATGCTG CTCTCTTTGC TGATTTCGAC CAATCCATTT ACTCCGGCAA GTCTTTTAAC TACTCCAAAT CTGTGATTTC ACCTCCTAAT TACGTTCCTG ATGAACACAT CACTGCTTAC TTGTCTAATA TCCAAAGAGG CGGTCTTGTT CAGCCCTTTG GTTGTTTGAT TGCTGTTGAA GAACCTAGTT TTAGGATCCT TGGTGTTAGT GAGAACTCCT CTGAGTTTCT TGGTTTGTTG TCTCTTGCTT CCACCTCTCA CTCTGGTGAG TTTGATAAAG TCAAGGGTTT GATTGGAATC GATGCAAGGA CGCTTTTTAC TCCTTCGTCT GGAGCTTCTT TGGCTAAAGC TGCTTCCTTT ACTGAGATTT CGTTGCTGAA TCCTGTTTTG GTCCATTCTA GGACGACCCA GAAGCCTTTT TATGCTATAC TTCACAGGAT TGATGCAGGG ATAGTCATGG ATTTGGAGCC TGCTAAATCC GGTGACCCGG CTTTGACCCT TGCAGGCGCA GTTCAGTCTC AGAAGCTCGC CGTTAGGGCT ATTTCTAGGC TGCAGTCGCT TCCCGGGGGA GATATTGGTG CGTTGTGTGA TACTGTTGTG GAAGATGTTC AGAGACTTAC CGGTTATGAC CGTGTTATGG TCTATCAGTT TCATGAAGAT GATCATGGTG AAGTTGTTTC TGAGATTAGA AGGTCTGATT TGGAGCCTTA TTTGGGTTTA CATTATCCTG CAACAGATAT TCCTCAGGCT GCTCGGTTCT TGTTCAAACA GAACCGTGTC CGAATAATTT GTGACTGCAA TGCAACTCCG GTTAAGGTTG TTCAGAGTGA GGAACTCAAG AGACCACTTT GTTTAGTTAA TTCTACTCTA AGAGCTCCTC ATGGCTGCCA TACGCAGTAT ATGGCGAATA TGGGCTCTGT AGCTTCTCTT GCACTCGCAA TTGTGATAAA AGGCAAAGAT TCCAGCAAGC TTTGGGGATT AGTTGTAGGT CATCATTGTT CTCCTAGATA CGTTCCATTC CCGTTGCGGT ATGCTTGTGA GTTTCTGATG CAAGCATTTG GACTTCAGCT TCAAATGGAA CTTCAGTTAG CATCACAGTT GGCTGAGAAG AAGGCTATGC GAACGCAGAC CTTGTTGTGT GATATGCTTC TCCGTGATAC TGTTTCCGCT ATTGTGACAC AATCTCCGGG TATTATGGAC CTTGTGAAAT GTGATGGAGC TGCGTTATAT TACAAGGGGA AATGTTGGTT GGTTGGTGTT ACTCCTAATG AGTCACAAGT TAAAGACTTG GTGAATTGGC TGGTGGAGAA TCACGGTGAT GATTCGACGG GTTTAACAAC TGATAGTTTG GTGGATGCGG GATACCCTGG CGCCATCTCA CTTGGAGATG CGGTTTGTGG TGTGGCTGCC GCAGGAATTT CTTCAAAAGA TTACTTACTT TGGTTCAGGT CCAATACTGC AAGTGCAATC AAATGGGGAG GAGCTAAACA TCATCCAAAG GATAAAGATG ATGCCGGAAG AATGCATCCG AGGTCATCGT TTAAAGCCTT TCTTGAAGTT GCGAAGACCA GGAGCTTGCC GTGGGAAATC TCAGAAATTG ATGCTATCCA TTCCCTAAGA CTTATAATGA GAGAGTCATT TACCAGCTCT AGGCCAGTTT TGTCTGGTAA TGACGTAGCA AGAGATGCTA ATGAGCTTAC CTCTTTTGTG TGTGAAATGG TTAGGGTGAT TGAAACCGCA ACTGCGCCTA TCTTTGGGGT TGATTCTTCC GGATGTATTA ATGGTTGGAA CAAGAAAATC GCTGAAATGA CGGGATTACT AGCTAGTGAA GCCATGGGGA AGTCACTTGC CGATGAGATT GTTCAAGAGG AATCACGCGC AGCTCTTGAA AGTCTCTTGT GCAAAGCCCT ACGAGGTGAA GAGGAGAAAA GTGTAATGCT AAAACTGAGA AAGTTTGGTC AAAACAATCA TCCGGATTCT TCTTCTGATG TGTGTGTTCT CGTTAACTCC TGCACGAGTC GGGATTATAC TGAAAAAATC ATTGGTGTCT GCTTCGTTGG TCAAGACATC ACTAGTGAGA AAGCAATAAC AGATAGATTC ATCAGATTGC AAGGAGATTA CAAGACTATT GTTCAAAGTT TAAATCCGTT GATTCCACCG ATATTTGCTT CAGATGAGAA TGCTTGTTGT TCTGAGTGGA ACGCAGCCAT GGAAAAGCTT ACCGGATGGT CAAAACACGA AGTGATTGGG AAAATGCTAC CCGGTGAAGT CTTTGGTGTC TTTTGTAAAG TGAAATGCCA AGATTCGCTC ACAAAGTTCT TGATCTCTCT GTACCAAGGA ATTGCTGGTG ATAATGTTCC TGAGAGTTCA CTGGTTGAGT TCTTTAATAA GGAAGGGAGG TACATAGAAG CGTCCTTAAC CGCGAACAAG AGTACAAACA TCGAAGGGAA AGTTATAAGA TGTTTCTTCT TCCTGCAGAT TATCAATAAA GAATCGAGTT TGAGCTGCCC AGAACTGAAA GAGAGCGCTC AAAGCCTCAA CGAATTAACT TACATAAGAC AAGAAATCAA GAATCCTCTC AAAGGTATCC GATTTGCCCA TAAGCTTCTT GAATCCTCAG AGATTTCAGC TAGCCAAAGG CAGTTTCTGG AGACTAGTGA TGCTTGTGAG AAGCAAATCA CGACAATAAT CGAAGGCACA GACTTGAAAA GCATTGAGGA AGGCAAGTTG CAATTGGAAA CAGAGGAGTT TCGACTTGAA AATATCTTGG ACACAATCAT TAGCCAAGTG ATGATTTTGC TGAGAGAGGG GAACTCACAA CTCAGGGTTG AAGTCGCCGA GGAGATCAAA ACGCTGCCTC TCTATGGTGA TAGAGTAAAG CTCCAGCTCA TTCTTGCTGA TCTTCTACGC AACATTGTGA ATCATGCGCC GTTTCCAAAT AGTTGGGTAG GAATCAATAT CTCACCAGGG CAGGAGCTTT CACGTGACAA TGGTCACTAT ATCCATCTAC AGTTCAGGAT GATACATCCA GGGAAAGGAC TTCCTTCAGA GATTCTAAGT GACATGTTTG AGACTCGAGA TGGATGGGTC ACGCCTGATG GTTTAGGGCT TAAGCTTTCA CGGAAACTAT TGGAACAGAT GAATGGTCGT GTGAGTTATG TCCGAGAAGA CGAACAGTGT TTCTTTCAGG TGGATCTTCA AGTCAAGACA ATGTTAGGGG TTGAGTCTAG CGGAACAGAG GCTAGTTCAA GCATAAAGTA GAAATTTTGA GTTACAAGGC T |
| Length | 3391 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT4G18130.1 |
| Description | phytochrome E |
| TAIR curator summary | member of Histidine Kinase |
| Alias | [PHYE][phytochrome E] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.48528 |
Ahg913850 | Protein kinase superfamily protein |
| 10.4403 |
Ahg488264 | bromodomain and extraterminal domain protein 9 |
| 11.6619 |
Ahg495015 | FAD/NAD(P)-binding oxidoreductase family protein |
| 12.2474 |
Ahg472957 | Glycosyl hydrolase family 47 protein |
| 12.6886 |
Ahg496574 | Regulator of chromosome condensation (RCC1) family protein |
| 12.8841 |
Ahg489476 | catalytics;carbohydrate kinases;phosphoglucan, water dikinases |
| 13.4164 |
Ahg470503 | Helicase protein with RING/U-box domain |
| 16.0935 |
Ahg944149 | Remorin family protein |
| 19.799 |
Ahg479498 | Protein of unknown function (DUF177) |
| 19.8997 |
Ahg475111 | O-fucosyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|